Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq412 96.9 3e-14
seq177 89.7 4e-12
>seq412
Length=416704
Score = 96.9 bits (106), Expect = 3e-14
Identities = 190/281 (68%), Gaps = 0/281 (0%)
Strand=Plus/Minus
Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241
|| ||||| ||||| ||||||||||| ||||| | || | || | || ||| | |||
Sbjct 396085 ACGAGACGGTTATCGAAATCTTCACCACCCAAGTGGGTGTCACCAGCGGTGGCTTTGACT 396026
Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301
| ||| | || ||||| | | ||| || | ||||| ||||| || || | |||
Sbjct 396025 TCGAAGATACCCTCTTCGATGGTCAACAGGGATACATCGAAAGTTCCTCCTCCGAGATCG 395966
Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361
||||| || || || || | || || || ||||| || || | |||||
Sbjct 395965 AAAATGAGGACGTTTCGCTCGCCGGTGACCTTCTTGTCGAGACCGTAGGCGATGGCAGCG 395906
Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421
||||| || || || || || | | ||| || | ||||| || | || || || ||
Sbjct 395905 GCAGTAGGCTCGTTGATGATACGGAGAACGTTCATACCAGAGATGGTACCGGCGTCCTTG 395846
Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
|||||||| | ||| || ||||| || || |||||||||||
Sbjct 395845 GTGGCTTGACGTTGGGAGTCGTTGAAGTAGGCAGGAACAGT 395805
>seq177
Length=145142
Score = 89.7 bits (98), Expect = 4e-12
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
|| || |||||||| | |||||||||||||||||| | ||| ||||||| |||| |||
Sbjct 35685 GAGTTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTTTGATTGATACAGCCGTTAAGACT 35744
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244
||||| |||||||| || || | ||||||||| || |||||| |||
Sbjct 35745 GCTGAGACTGGTTACATCCAGCGTCGTCTTGTCAAGGCCCTCGAAGATGTTA 35796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740599862428572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |