Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq433 120 3e-22 seq298 116 4e-21 seq415 87.8 2e-12 >seq433 Length=1580550 Score = 120 bits (132), Expect = 3e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| |||||||| || || ||| | |||||||||||||| || Sbjct 1108267 GGTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCCTCGAGCTGCTTTCC 1108208 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || |||||||||||||||||||| |||||||| |||||| || Sbjct 1108207 AGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTT 1108148 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || |||| | ||| || |||| || | ||| ||||| || || || Sbjct 1108147 GACGTTATCGATGGTATCGGAAGACTCGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGT 1108088 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 1108087 CTTGACGAAGATCTGCATG 1108069 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || || ||||| || || |||||| | || ||| | |||||||| | Sbjct 1108501 ATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCA-TCCTCGAGTT 1108443 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || ||||||| || || ||||| |||||||||||||||||||| ||||| Sbjct 1108442 GCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCT 1108383 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | || | ||||||| | ||| || |||| |||| ||| ||||| | Sbjct 1108382 TGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAG 1108323 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || ||||| || ||||| Sbjct 1108322 TGAGGGTCTTGACGAAGATTTGCAT 1108298 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || ||||| || | ||| | ||||| |||||||| || Sbjct 1108722 GTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCA 1108663 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || || || ||||| ||||||||||| |||||||| ||||| |||| Sbjct 1108662 GCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1108603 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||||| | |||||| || | |||| ||| ||||| || || || Sbjct 1108602 ACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGCCCGTAAGCGTC 1108543 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 1108542 TTGACGAAGATCTGCATG 1108525 >seq298 Length=714934 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| ||| |||||||||||||||||| Sbjct 385599 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACC-GTCCTCGAGCTGCTTGCC 385541 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||| || ||||| || |||||||||||||| ||||| ||| Sbjct 385540 AGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCCTT 385481 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | | ||| || |||| ||||| || ||||| || ||||| Sbjct 385480 AACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGT 385421 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 385420 CTTCACAAAGATTTGCAT 385403 Score = 105 bits (116), Expect = 6e-18 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || || || || || ||| ||| ||| |||||||||||||| Sbjct 385371 GTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTGCGACC-GTCTTCGAGCTGCTTGCC 385313 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || || ||||| |||||||||||||||||||| || |||||| ||| Sbjct 385312 AGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCTTGGATCTTCGCCTT 385253 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | | ||||| || | ||||| || || ||||| || || Sbjct 385252 CACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGT 385193 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || || || ||||||||| || Sbjct 385192 CTTGACAAAGATCTGCATGCCT 385171 >seq415 Length=258813 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 148530 GCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTG 148589 || || |||||| |||| |||||||||||| ||| ||| || |||||| || || || Sbjct 185307 GCAGCGAGTTCGGAGCTGGCCTCGAGCGCGGCGTGGTAGATGGTCTCGAAGATCTGGATG 185366 Query 148590 TTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCA 148649 || || ||| | || | ||| | |||||||| || || || || ||||| Sbjct 185367 TTAAGTTCTTTCGCAGCCTGGGAATCGAAAGGCATACGAAGAGCCATGAAAGCATCGGCG 185426 Query 148650 AGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG 148709 || ||||| ||||| | ||||| |||| ||| |||||||| |||| || | Sbjct 185427 AGACCCTGAACGCCAAGACCAATAGGCCTGTGACGCATGTTGGACCGGCGAGCTTCAGGG 185486 Query 148710 AGCGGATAGTGGTTGCGGTCGATGATCTTGT 148740 | || |||| |||| ||| |||||||||| Sbjct 185487 ATGGGGTAGTAGTTGACGTCAATGATCTTGT 185517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417041403280