Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq298 96.9 2e-15 seq433 87.8 1e-12 >seq298 Length=714934 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33542 CCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCA 33601 |||| || ||||||||||| || || ||||||||||| || || ||||| | || || | Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779 Query 33602 ATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAA 33661 ||| || || ||||| || | ||||| || || | || | ||| || ||||| || Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719 Query 33662 TTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTA 33720 | ||| | || |||| ||| | |||||| ||| || || || | ||||| || || Sbjct 385718 TCTTC-GCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTG 385660 Query 33721 CCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || ||||| |||||| Sbjct 385659 CCGGTAAGGGTCTTCACGAAGATTTGCATA 385630 >seq433 Length=1580550 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || ||||||||||| ||||| || || | || || | ||| Sbjct 1108956 TGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTGT 1108897 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||| ||||| | || | |||||| || || ||| || Sbjct 1108896 TTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTGAATCTTA 1108837 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| |||| ||| | |||||| ||||| || || | ||||| || || || || Sbjct 1108836 GCCTTC-ACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGT 1108778 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || || |||||||||||| Sbjct 1108777 GAGGGTCTTGACGAAGATCTGCATA 1108753 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || |||||||| || ||||| ||||| | || || | || ||||| || || Sbjct 1108717 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAA 1108658 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| ||| || || || | || | || || ||||| ||| || || | ||| Sbjct 1108657 GATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CAT 1108599 Query 33678 AGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| ||||||| ||| ||||| || | |||||| || || || || | ||| || | Sbjct 1108598 TATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGA 1108539 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 1108538 CGAAGATCTGCAT 1108526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701508218240