Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq433 107 5e-18
seq298 96.9 8e-15
>seq433
Length=1580550
Score = 107 bits (118), Expect = 5e-18
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || || |||||| | || || ||| ||| |||
Sbjct 1108757 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAATCTTCCGAC 1108816
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | || || ||| ||||||||||| || ||||| ||| || || ||
Sbjct 1108817 ACAATTGACAATGTGAAGGCTAAGATTCAAGATAAGGAAGGTATTCCCCCTGATCAACAG 1108876
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||||||||| || ||| | |||||||| | || | | ||||||||| |
Sbjct 1108877 CGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGTCGTACGCTCTCTGATTACAACATT 1108936
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| || || |||||||||
Sbjct 1108937 CAGAAGGAGTCCACCCTCCACCTTGTT 1108963
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| ||||| || || || || ||||| ||||| ||||| || |||
Sbjct 1108529 CAGATCTTCGTCAAGACGCTTACGGGCAAGACCATCACGTTGGAGGTGGAGTCATCCGAC 1108588
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || || || || ||| |||
Sbjct 1108589 ACCATTGATAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAACAA 1108648
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| ||||||||| | || ||||| | || | | || |||||| ||
Sbjct 1108649 CGTCTGATCTTCGCTGGAAAGCAGCTAGAGGATGGGCGCACCCTCTCTGACTACAACATC 1108708
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
|||||||||||||| || || ||||||
Sbjct 1108709 CAGAAAGAGTCTACACTCCATCTTGTT 1108735
Score = 91.5 bits (100), Expect = 3e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822
|||||||||||| || ||||| ||||||| ||| ||||||| || || | ||||| ||
Sbjct 1108279 AACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCCTC 1108220
Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
||||||||||| |||||||| || ||||| ||
Sbjct 1108219 GAGCTGCTTTCCAGCGAAGATCAGACGTTGCTG 1108187
Score = 89.7 bits (98), Expect = 1e-12
Identities = 146/208 (70%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || || || ||| | ||||| || ||| ||
Sbjct 1108073 CAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACTCTCGAAGTCGAGTCTTCCGAT 1108132
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || ||||| || ||| || || || || || || || ||| ||
Sbjct 1108133 ACCATCGATAACGTCAAAGCCAA-GATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCA 1108191
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | || |||||||| ||||||||| | || ||||| | || || | || ||||| |
Sbjct 1108192 ACGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGGCGCACCCTGTCTGACTACAATAT 1108251
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379
|||||| ||||| || ||||||||||||
Sbjct 1108252 CCAGAAGGAGTCAACCCTTCACCTTGTT 1108279
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822
|||||| || || |||||||||||||||| || ||||||| | || | ||||| ||
Sbjct 1108735 AACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTC 1108676
Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
||||||||||| |||||||| || ||||||||
Sbjct 1108675 TAGCTGCTTTCCAGCGAAGATCAGACGTTGTTG 1108643
>seq298
Length=714934
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || ||||| || || |||||||| | || |||||| |||||||
Sbjct 385178 CAGATCTTTGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAATCTTCTGAC 385237
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| ||||| || ||||| || || || |||
Sbjct 385238 ACTATTGATAACGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCCTCCCGATCAGCAA 385297
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||| || || |||||| | ||||| || | || || | || || ||| |
Sbjct 385298 CGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTGTCTGACTATAACATT 385357
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||||||||| || || ||
Sbjct 385358 CAGAAGGAGTCTACTCTCCATCTCGT 385383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181811381626862
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |