Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq433 89.7 5e-13 seq298 82.4 7e-11 >seq433 Length=1580550 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||| || | ||||| |||||| |||||||| |||| Sbjct 1108947 GACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCG 1108888 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||||||||| || || || ||||| ||||| ||| || |||| Sbjct 1108887 AAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACA 1108828 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | || || |||| || | || || ||||| || || || Sbjct 1108827 TTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 1108768 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 1108767 ACGAAGATCTGCAT 1108754 >seq298 Length=714934 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || |||||||| ||||| || ||| || ||||||||||| || || | | Sbjct 385368 GACTCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCA 385309 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || ||||| ||||| |||||||| ||||| || || |||| Sbjct 385308 AAGATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCTTGGATCTTCGCCTTCACG 385249 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| || | | ||||| || | || | ||| || || || || || || Sbjct 385248 TTATCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTG 385189 Query 132110 ATGAAAATCTGCATGACT 132127 | || ||||||||| || Sbjct 385188 ACAAAGATCTGCATGCCT 385171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607494347920