Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq433 89.7 5e-13
seq298 82.4 7e-11
>seq433
Length=1580550
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || ||||||||||| || | ||||| |||||| |||||||| ||||
Sbjct 1108947 GACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCG 1108888
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||||||||| || || || ||||| ||||| ||| || ||||
Sbjct 1108887 AAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACA 1108828
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || |||| | || || |||| || | || || ||||| || || ||
Sbjct 1108827 TTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 1108768
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 1108767 ACGAAGATCTGCAT 1108754
>seq298
Length=714934
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || |||||||| ||||| || ||| || ||||||||||| || || | |
Sbjct 385368 GACTCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCA 385309
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||| || ||||| ||||| |||||||| ||||| || || ||||
Sbjct 385308 AAGATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCTTGGATCTTCGCCTTCACG 385249
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||| || | | ||||| || | || | ||| || || || || || ||
Sbjct 385248 TTATCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTG 385189
Query 132110 ATGAAAATCTGCATGACT 132127
| || ||||||||| ||
Sbjct 385188 ACAAAGATCTGCATGCCT 385171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476607494347920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |