Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq370 221 2e-51 >seq370 Length=376741 Score = 221 bits (244), Expect = 2e-51 Identities = 357/505 (71%), Gaps = 14/505 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| || |||||||| ||||| ||||||||| | |||| Sbjct 251270 GATCTGGCAAATGTAC-AAGAAGGCTGAAGCCTCCTTCTGGACTGCCGAGGAGATGGACC 251328 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| ||||| ||| | | |||| ||||||| || |||||| Sbjct 251329 TCTCCAAGGACCTTCATGACTGGAACAACCGCCTTAACGACAACGAGCGTCACTTCATCT 251388 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 || ||||||||||| || ||||||| ||||| ||||| ||||||||| | | Sbjct 251389 CACATGTCCTCGCCTTCTT-CGCCGCCTCGGATGGTATCGTCAACGAGAACCTCGTGGAG 251447 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| || || ||||| | |||||||| | || || || ||||| ||| Sbjct 251448 CGCTTCTCCAATGAAGTCCAGGCCGCTGAGGCACGATGTTTCTATGGTTTCCAAATCATG 251507 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || |||||||| || || || ||||| || || |||||||||||| |||||||||| Sbjct 251508 ATGGAGAACATCCATTCAGAGACATACTCCCTGCTTATCGACACCTACATCAAGGACCCC 251567 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | | || || ||||||| |||| | ||||| | || | | | ||| || ||| Sbjct 251568 GCCCAGCGCGAATACCTCTTCGACGCCGTTGACACTATCCCTTGCATCAAGAAGAAAGCC 251627 Query 1456132 GACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 |||||||| | | ||||| | | || ||| || || ||||||||| || || | Sbjct 251628 GACTGGGCTCTCACCTGGATCTCCGATAAAGAG----TCTAC-CTTTGCCGAACGTCTAG 251682 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247 | | ||| || || || |||||||| || ||||| ||| |||| ||||||| ||| Sbjct 251683 TTGCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCTGGT 251742 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGG 1456272 | |||||||| || ||||||||||| Sbjct 251743 TGAAGAAGCGTGGTCTCATGCCCGG 251767 Score = 125 bits (138), Expect = 1e-22 Identities = 297/437 (68%), Gaps = 9/437 (2%) Strand=Plus/Minus Query 1455876 GAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGC 1455935 || ||||| ||| | || ||| ||||| || ||| ||| | |||||||| || Sbjct 250137 GAACGCCACTTCCTTTCGCGCGTTCTCGCGTTCTTT-GCCTCTTCGGATGGCATTGTCAA 250079 Query 1455936 CGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCA-ATTGCCAGAGGCACGTTTGTTTT 1455994 ||||||||| | | ||||| || || || || ||||| ||||| |||| || | Sbjct 250078 CGAGAACCTTGTGGAACGCTTCTCGAGTGAAGTGCAGATTGCG-GAGGCCCGTTGTTTCT 250020 Query 1455995 ACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACA 1456054 | || || || || |||||||| | ||||| || | || || ||||| || |||| Sbjct 250019 ATGGTTTTCAAATTATGATCGAAAATGTGCACTCCGAGGCGTATTCCCTCCTAATTGACA 249960 Query 1456055 CCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGT 1456114 | ||| ||||||| || | ||| |||| ||||| || || ||||| || | || | Sbjct 249959 CTTACATCAAGGATCCTGACGAACGGGACTTTCTCTTCCGGGCGATCGAAACCATTCCTT 249900 Query 1456115 CGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTT 1456174 | | | | ||||||| || ||||| |||| ||||| | ||| | || || || Sbjct 249899 CTATCAAGCAAAAGGCAGAATGGGCATTGAAATGGATTTCTACCGAGA-CATCCGCATTT 249841 Query 1456175 TGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTG 1456233 | | |||||||| || | || || || || || ||||| ||||| || || || || Sbjct 249840 T-CGGAGCGGCTTGTTGCTTTCGCAGCAGTGGAAGGCATTTTTTTTTCAGGATCCTT-TG 249783 Query 1456234 C-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAA 1456292 | |||||||||||| | | ||||| || | ||||| || || || |||||| Sbjct 249782 CTGCCATCTTTTGGATGAGAAAGCGAGGATTGATGCCAGGA-TTGACTTTCTCCAACGAG 249724 Query 1456293 TTTATCAGTCGCGACGA 1456309 | |||||||||||||| Sbjct 249723 CTAATCAGTCGCGACGA 249707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177751206956764