Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq370 221 2e-51
>seq370
Length=376741
Score = 221 bits (244), Expect = 2e-51
Identities = 357/505 (71%), Gaps = 14/505 (3%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||| || |||||||| ||||| ||||||||| | ||||
Sbjct 251270 GATCTGGCAAATGTAC-AAGAAGGCTGAAGCCTCCTTCTGGACTGCCGAGGAGATGGACC 251328
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| ||||| ||| | | |||| ||||||| || ||||||
Sbjct 251329 TCTCCAAGGACCTTCATGACTGGAACAACCGCCTTAACGACAACGAGCGTCACTTCATCT 251388
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|| ||||||||||| || ||||||| ||||| ||||| ||||||||| | |
Sbjct 251389 CACATGTCCTCGCCTTCTT-CGCCGCCTCGGATGGTATCGTCAACGAGAACCTCGTGGAG 251447
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| || || ||||| | |||||||| | || || || ||||| |||
Sbjct 251448 CGCTTCTCCAATGAAGTCCAGGCCGCTGAGGCACGATGTTTCTATGGTTTCCAAATCATG 251507
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || |||||||| || || || ||||| || || |||||||||||| ||||||||||
Sbjct 251508 ATGGAGAACATCCATTCAGAGACATACTCCCTGCTTATCGACACCTACATCAAGGACCCC 251567
Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131
| | || || ||||||| |||| | ||||| | || | | | ||| || |||
Sbjct 251568 GCCCAGCGCGAATACCTCTTCGACGCCGTTGACACTATCCCTTGCATCAAGAAGAAAGCC 251627
Query 1456132 GACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188
|||||||| | | ||||| | | || ||| || || ||||||||| || || |
Sbjct 251628 GACTGGGCTCTCACCTGGATCTCCGATAAAGAG----TCTAC-CTTTGCCGAACGTCTAG 251682
Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247
| | ||| || || || |||||||| || ||||| ||| |||| ||||||| |||
Sbjct 251683 TTGCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCTGGT 251742
Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGG 1456272
| |||||||| || |||||||||||
Sbjct 251743 TGAAGAAGCGTGGTCTCATGCCCGG 251767
Score = 125 bits (138), Expect = 1e-22
Identities = 297/437 (68%), Gaps = 9/437 (2%)
Strand=Plus/Minus
Query 1455876 GAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGC 1455935
|| ||||| ||| | || ||| ||||| || ||| ||| | |||||||| ||
Sbjct 250137 GAACGCCACTTCCTTTCGCGCGTTCTCGCGTTCTTT-GCCTCTTCGGATGGCATTGTCAA 250079
Query 1455936 CGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCA-ATTGCCAGAGGCACGTTTGTTTT 1455994
||||||||| | | ||||| || || || || ||||| ||||| |||| || |
Sbjct 250078 CGAGAACCTTGTGGAACGCTTCTCGAGTGAAGTGCAGATTGCG-GAGGCCCGTTGTTTCT 250020
Query 1455995 ACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACA 1456054
| || || || || |||||||| | ||||| || | || || ||||| || ||||
Sbjct 250019 ATGGTTTTCAAATTATGATCGAAAATGTGCACTCCGAGGCGTATTCCCTCCTAATTGACA 249960
Query 1456055 CCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGT 1456114
| ||| ||||||| || | ||| |||| ||||| || || ||||| || | || |
Sbjct 249959 CTTACATCAAGGATCCTGACGAACGGGACTTTCTCTTCCGGGCGATCGAAACCATTCCTT 249900
Query 1456115 CGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTT 1456174
| | | | ||||||| || ||||| |||| ||||| | ||| | || || ||
Sbjct 249899 CTATCAAGCAAAAGGCAGAATGGGCATTGAAATGGATTTCTACCGAGA-CATCCGCATTT 249841
Query 1456175 TGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTG 1456233
| | |||||||| || | || || || || || ||||| ||||| || || || ||
Sbjct 249840 T-CGGAGCGGCTTGTTGCTTTCGCAGCAGTGGAAGGCATTTTTTTTTCAGGATCCTT-TG 249783
Query 1456234 C-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAA 1456292
| |||||||||||| | | ||||| || | ||||| || || || ||||||
Sbjct 249782 CTGCCATCTTTTGGATGAGAAAGCGAGGATTGATGCCAGGA-TTGACTTTCTCCAACGAG 249724
Query 1456293 TTTATCAGTCGCGACGA 1456309
| ||||||||||||||
Sbjct 249723 CTAATCAGTCGCGACGA 249707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177751206956764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |