Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq370 158 2e-33
>seq370
Length=376741
Score = 158 bits (174), Expect = 2e-33
Identities = 356/532 (67%), Gaps = 11/532 (2%)
Strand=Plus/Plus
Query 39631 ATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACC 39690
||| | |||||| || | ||| |||| ||||| || || || | ||| ||||| | ||
Sbjct 249697 ATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAATCCTGGCATCAATCC 249756
Query 39691 ACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGC 39750
|||||| | | |||||| ||||||||||| ||||| ||||| || |||||||| |||||
Sbjct 249757 TCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAAATGCCTTCCACTGC 249816
Query 39751 TGCAAATGCAACAAGTCTCTCTCCGTAACT-----TGTATCATTATGTATCCACTTCTGT 39805
||| || |||||||| | ||||| || | ||| || || ||||| ||| |
Sbjct 249817 TGCGAAAGCAACAAG--CCGCTCCGAAAATGCGGATGTCTCGGTAGAAATCCATTTCAAT 249874
Query 39806 GCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGT 39865
||||| || || || | ||| | | |||| || ||||| || || |||||| | |
Sbjct 249875 GCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGGAAGAGAAAGTCC 249934
Query 39866 TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATG 39925
||| ||| ||| || | || || || |||| || |||| || || || |
Sbjct 249935 CGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATACGCCTCGGAGTGCACA 249994
Query 39926 TTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAA 39985
||||| ||| || ||||| || || ||||| | || || | ||| || || ||
Sbjct 249995 TTTTCGATCATAATTTGAAAACCATAGAAACAACGGGCCTCCGCAATCTGCACTTCACTC 250054
Query 39986 CAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAAT 40045
| || | |||| | | || || || || || ||||| || |||||| || || |
Sbjct 250055 GAGAAGCGTTCCACAAGGTTCTCGTTGACAATGCCATCCGAAGAGGCAAAGAACGCGAGA 250114
Query 40046 ACATGTTTAATAAAATATTTTTCATCGG--GTGTCAATTTATTCCAGTCATTGATATCTT 40103
|| | || || | ||| ||| ||||| || ||||||| | |||| |
Sbjct 250115 ACGCGCGAAAGGAAGTGGCGTTC--CGGATCTGTCAGGTTCATCCAGTCCCAGGTATCAT 250172
Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155
|||| || | |||||| | ||||| ||||| |||| |||||| |||||
Sbjct 250173 GCGATAAGTCAATTTCTTCGACAGTCCAGAACGAAGCCTGTGCCTTCTTGTA 250224
Score = 109 bits (120), Expect = 8e-19
Identities = 243/364 (67%), Gaps = 3/364 (1%)
Strand=Plus/Minus
Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667
|||| || |||||| || || ||| | ||| ||||| | || || | ||||||||
Sbjct 251836 AACAGTAGGCAGGCAAAATCGGTATGCATGCCTTCATCACGGCTGATGAGCTCGTTAGAG 251777
Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727
||||| | || ||||| ||||||||||| || | ||| || |||| || ||||| ||
Sbjct 251776 AATGTCAAGCCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAGCCG 251717
Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787
|| ||||| ||||| || || || || || ||||| || | || | | | | ||
Sbjct 251716 GAGAAGAAAATGCCCTCCACAGCAGCGAAGGCAACTAGACGTTCGGCAAAGGTAGACTCT 251657
Query 39788 TTAT---GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844
|||| ||||| | | ||||| || ||||||||||| | ||||| || || ||
Sbjct 251656 TTATCGGAGATCCAGGTGAGAGCCCAGTCGGCTTTCTTCTTGATGCAAGGGATAGTGTCA 251597
Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904
| || | ||||| || | | | || || | || || || || | |||
Sbjct 251596 ACGGCGTCGAAGAGGTATTCGCGCTGGGCGGGGTCCTTGATGTAGGTGTCGATAAGCAGG 251537
Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964
|| | |||||||||||||| || ||| || || || || || ||||||| |||
Sbjct 251536 GAGTATGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAACCATAGAAACATCGTGCC 251477
Query 39965 TCAG 39968
||||
Sbjct 251476 TCAG 251473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686903459284080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |