Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq415 96.9 4e-15 seq370 86.0 8e-12 >seq415 Length=258813 Score = 96.9 bits (106), Expect = 4e-15 Identities = 180/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 |||||||| | ||||| || ||||| ||| ||| ||||| | | | | || Sbjct 186340 ATGGATGTTGAGACCAATTCCACCAGCAGTCTTGCTGATCATGGCACAGTTCTTCAAGGT 186399 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 |||||||||| | ||| || || ||||| || || ||||||||| | || ||| Sbjct 186400 ATCATAGATACCTTCGATGGAATCTTCCTTCATGCAGACAAGGAAGCAGGAGCTCAACTG 186459 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGG 112001 || ||||||||||| ||||||||||| || | ||||| |||| ||| | | | Sbjct 186460 AGGATGAGGTGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGCGTGAA-ATAGCGCTCTG 186518 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 ||||| | || || || | ||| |||||||| |||||||||||||| |||| Sbjct 186519 ACATCAGATGATAAGTTTCGAGAACACGTTCAATGTCCCGCCCGTGGATGCCGACAGCGA 186578 Query 112062 CCCGCATGAACATGTACTGTGG 112083 | ||||| | ||| | ||||| Sbjct 186579 CACGCATAATCATTTGTTGTGG 186600 >seq370 Length=376741 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 || ||||| ||| || || || || ||||| | || ||||||||||| |||||| Sbjct 251806 CCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAGCCGGGCATGAGACCACGCTTC 251747 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 |||||||| | || | ||| || ||||||||||| || ||||||||| || || Sbjct 251746 TTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAAATGCCCTCCACAGCAGCGAAG 251687 Query 122797 GCAAAAAGGCGTTCGGCGAAGG 122818 |||| || |||||||| |||| Sbjct 251686 GCAACTAGACGTTCGGCAAAGG 251665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027117051200