Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq415 96.9 4e-15
seq370 86.0 8e-12
>seq415
Length=258813
Score = 96.9 bits (106), Expect = 4e-15
Identities = 180/262 (69%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882
|||||||| | ||||| || ||||| ||| ||| ||||| | | | | ||
Sbjct 186340 ATGGATGTTGAGACCAATTCCACCAGCAGTCTTGCTGATCATGGCACAGTTCTTCAAGGT 186399
Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942
|||||||||| | ||| || || ||||| || || ||||||||| | || |||
Sbjct 186400 ATCATAGATACCTTCGATGGAATCTTCCTTCATGCAGACAAGGAAGCAGGAGCTCAACTG 186459
Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGG 112001
|| ||||||||||| ||||||||||| || | ||||| |||| ||| | | |
Sbjct 186460 AGGATGAGGTGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGCGTGAA-ATAGCGCTCTG 186518
Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061
||||| | || || || | ||| |||||||| |||||||||||||| ||||
Sbjct 186519 ACATCAGATGATAAGTTTCGAGAACACGTTCAATGTCCCGCCCGTGGATGCCGACAGCGA 186578
Query 112062 CCCGCATGAACATGTACTGTGG 112083
| ||||| | ||| | |||||
Sbjct 186579 CACGCATAATCATTTGTTGTGG 186600
>seq370
Length=376741
Score = 86.0 bits (94), Expect = 8e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
|| ||||| ||| || || || || ||||| | || ||||||||||| ||||||
Sbjct 251806 CCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAGCCGGGCATGAGACCACGCTTC 251747
Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
|||||||| | || | ||| || ||||||||||| || ||||||||| || ||
Sbjct 251746 TTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAAATGCCCTCCACAGCAGCGAAG 251687
Query 122797 GCAAAAAGGCGTTCGGCGAAGG 122818
|||| || |||||||| ||||
Sbjct 251686 GCAACTAGACGTTCGGCAAAGG 251665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628027117051200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |