Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq370 111 2e-19 seq433 82.4 9e-11 >seq370 Length=376741 Score = 111 bits (122), Expect = 2e-19 Identities = 353/540 (65%), Gaps = 13/540 (2%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 || || |||||| |||||| || || ||||| || || ||||||||||| |||||| Sbjct 251806 CCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAGCCGGGCATGAGACCACGCTTC 251747 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 ||||||||||| || | || ||||| |||||||| || ||||||||| ||||| Sbjct 251746 TTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAAATGCCCTCCACAGCAGCGAAG 251687 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 130210 |||| ||||| || ||||||| |||| | |||| | ||| | | ||||| Sbjct 251686 GCAACTAGACGTTCGGCAAAGG---TAGACTCTTTATCGGAGATCCAGGTGAGAGCCCAG 251630 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | || || |||| ||| || |||| || | | || || ||||| | | | Sbjct 251629 TCGGCTTTCTTCTTGATGCAAGGGATAGTGTCAACGGCGTCGAAGAGGTATTCGCGCTGG 251570 Query 130271 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TTC 130329 | || || |||||||| | || || || || ||||| || ||||| | | | Sbjct 251569 GCGGGGTCCTTGATGTAGGTGTCGATAAGCAGGGAGTATGTCTCTGAATGGATGTTCTCC 251510 Query 130330 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAA 130389 || ||| || || | |||||| | || || || ||| || |||| || | | Sbjct 251509 ATCATGATTTGGAAAC-CATAGAAACATCGTGCCTCAGCGGCCTGGACTTCAT-TGGAGA 251452 Query 130390 ATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 130448 | | | || ||||| || || ||||| || | || || || || |||| || Sbjct 251451 AGCGCTCCACGAGGTTCTCGTTGACGATACCATCCGAGGCGGCGAAGAAGGCGAGGACAT 251392 Query 130449 ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCG 130505 ||||| | | || || ||||| | || | |||||||| | ||| ||||| | Sbjct 251391 GTGAGATGAAGTGACGCTCGTTGTCGTTAAGGCGGTTGTTCCAGTCATGAAGGTCCTTGG 251332 Query 130506 AGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTCCCAGA 130565 |||| || | |||||| |||||||| | || ||||||||| || | || ||||| Sbjct 251331 AGAGGTCCATCTCCTCGGCAGTCCAGAAGGAGGCTTCAGCCTTCTTGTACATTTGCCAGA 251272 >seq433 Length=1580550 Score = 82.4 bits (90), Expect = 9e-11 Identities = 274/417 (66%), Gaps = 21/417 (5%) Strand=Plus/Plus Query 14062 ACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGC 14121 ||| ||||| ||||| || || | | |||| ||| || | |||| | ||| || | Sbjct 788923 ACGGTCAAATCGACCAGGACGCATCAAGGCGGGGTCGAGAACATCAGGTCTGTTTGTGCC 788982 Query 14122 CGCGATGACAACGATGCCCGTCTCGTTAT---CAAAGCCATCCATCTCAGTCAAGAGTTG 14178 || | || ||||||| || ||||| |||||||||||||||| | ||| || Sbjct 788983 TGCAAGGATAACGATGT--GT-TCGTTGGTGCCAAAGCCATCCATCTCGACGAGGAGCTG 789039 Query 14179 ATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCA---TACCACCC---GCACTGCGTTG 14232 |||| || ||||||||| ||||| || | | |||||| | || || | Sbjct 789040 GTTGAGTGTCGATTCGCGTTCGTCATTGCCACCAAAGTTGCCACCCTTTCCTCT-CGAT- 789097 Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAAC 14292 ||||| | ||| || ||||| || ||||| | ||| || || ||| | || Sbjct 789098 -TTACCAATGGCATCGATTTCGTCAATGAAGATGATGCAAGGGGCATTCTTCTTTGCGGA 789156 Query 14293 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 14352 | | |||| ||| ||||| | | ||| || || || ||||||||||| || | || Sbjct 789157 TGCGAAGAGATCACGCACGCGAGAAGAACCAACGCCGACGAACATCTCCACGAACTCGGA 789216 Query 14353 GGCGGA-ACATTGG--ATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409 |||| || || | |||||| || || ||| || || | ||| ||| || || Sbjct 789217 ACCGGAGAC---GGAAAGGAAGGGTACCGAAGCTTCTCCTGCAGTTGCTTTGGCAAGTAG 789273 Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 ||||| || || ||||| ||| | |||| ||| ||||| |||||| | ||||| Sbjct 789274 AGTCTTACCTGTACCTGGAGGCCCGGAAAGAATGGCGCCACGAGGGATCTTCGCACC 789330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430391666320