Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq433 102 1e-16 seq415 96.9 4e-15 >seq433 Length=1580550 Score = 102 bits (112), Expect = 1e-16 Identities = 178/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 169201 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 169260 ||| |||||||||||||| || ||||| || || |||| | || |||||| || Sbjct 1030876 ATCAGTCATGATCATGAGTCGCCCATAACGGAGACTGGAAGCGTCCGAATAGTCTTTGTT 1030935 Query 169261 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACT-CTTGGTTTGATGTGAGCTGTG 169319 ||||| || |||| |||||||||| || ||||| | ||| ||| ||| ||| | Sbjct 1030936 GTGTTGCAGCCCCATAATCTTCTTGATATT-TTGAATTTCTTCATTTTTCATGATCTG-G 1030993 Query 169320 TGACAGAG-GCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGA 169378 | | | | || || || ||||| |||| || ||||| ||||| |||||| | | Sbjct 1030994 TCATGGCGAGCCTCCCGTACATTGAGCAACTTTCCTCGAAGCGGGAAAACACCGAAATTG 1031053 Query 169379 TCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTG 169438 || ||||||||||| ||||| |||| || || | || |||||||| || ||||| Sbjct 1031054 TCTCGACCAACGACTCCCAGACCAGCGATGGCCAGGGCTTTAGCCGAGTCGCCTTCGGTT 1031113 Query 169439 ACGATGAGCGTACA 169452 | ||| | ||||| Sbjct 1031114 AAGATTAAAGTACA 1031127 >seq415 Length=258813 Score = 96.9 bits (106), Expect = 4e-15 Identities = 207/306 (68%), Gaps = 14/306 (5%) Strand=Plus/Minus Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175 || || |||||||| | ||| ||| || | ||||| |||| | ||||| || Sbjct 185557 AAGCTTCACGAAGTCGCCAAAGTTGTTGCCTATAACCTCAACAAGATCATTGACGTCAAC 185498 Query 105176 TTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 105232 | |||||| | ||| ||||| || || ||| | ||| | || |||||||| Sbjct 185497 TACTACCCCATCCCTGAA---GCTCGCCGGTCCAACATGCGTCACAGGCCTATTGGTCTT 185441 Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT-GATTCCGA 105288 || |||||||||||||| |||| ||||| |||| || | || ||| |||||| | Sbjct 185440 GGCGTTCAGGGTCTCGCCGATGCTTTCATGGCTCTTCGT----ATGCCTTTCGATTCCCA 185385 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348 | ||||| ||| | || | || || |||||||| || |||||||| || ||||| Sbjct 185384 GGCTGCGAAAGAACTTAACATCCAGATCTTCGAGACCATCTACCACGCCGCGCTCGAGGC 185325 Query 105349 GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408 || || || | || | ||||||||| || || || | || || ||| ||||| Sbjct 185324 CAGCTCCGAACTCGCTGCTCGTGATGGTCCCTACGAGACTTGGGAAGGCAGTCCTGCTTC 185265 Query 105409 ACAAGG 105414 |||||| Sbjct 185264 ACAAGG 185259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256265147280