Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq433 102 1e-16
seq415 96.9 4e-15
>seq433
Length=1580550
Score = 102 bits (112), Expect = 1e-16
Identities = 178/254 (70%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 169201 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 169260
||| |||||||||||||| || ||||| || || |||| | || |||||| ||
Sbjct 1030876 ATCAGTCATGATCATGAGTCGCCCATAACGGAGACTGGAAGCGTCCGAATAGTCTTTGTT 1030935
Query 169261 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACT-CTTGGTTTGATGTGAGCTGTG 169319
||||| || |||| |||||||||| || ||||| | ||| ||| ||| ||| |
Sbjct 1030936 GTGTTGCAGCCCCATAATCTTCTTGATATT-TTGAATTTCTTCATTTTTCATGATCTG-G 1030993
Query 169320 TGACAGAG-GCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGA 169378
| | | | || || || ||||| |||| || ||||| ||||| |||||| | |
Sbjct 1030994 TCATGGCGAGCCTCCCGTACATTGAGCAACTTTCCTCGAAGCGGGAAAACACCGAAATTG 1031053
Query 169379 TCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTG 169438
|| ||||||||||| ||||| |||| || || | || |||||||| || |||||
Sbjct 1031054 TCTCGACCAACGACTCCCAGACCAGCGATGGCCAGGGCTTTAGCCGAGTCGCCTTCGGTT 1031113
Query 169439 ACGATGAGCGTACA 169452
| ||| | |||||
Sbjct 1031114 AAGATTAAAGTACA 1031127
>seq415
Length=258813
Score = 96.9 bits (106), Expect = 4e-15
Identities = 207/306 (68%), Gaps = 14/306 (5%)
Strand=Plus/Minus
Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175
|| || |||||||| | ||| ||| || | ||||| |||| | ||||| ||
Sbjct 185557 AAGCTTCACGAAGTCGCCAAAGTTGTTGCCTATAACCTCAACAAGATCATTGACGTCAAC 185498
Query 105176 TTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 105232
| |||||| | ||| ||||| || || ||| | ||| | || ||||||||
Sbjct 185497 TACTACCCCATCCCTGAA---GCTCGCCGGTCCAACATGCGTCACAGGCCTATTGGTCTT 185441
Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT-GATTCCGA 105288
|| |||||||||||||| |||| ||||| |||| || | || ||| |||||| |
Sbjct 185440 GGCGTTCAGGGTCTCGCCGATGCTTTCATGGCTCTTCGT----ATGCCTTTCGATTCCCA 185385
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348
| ||||| ||| | || | || || |||||||| || |||||||| || |||||
Sbjct 185384 GGCTGCGAAAGAACTTAACATCCAGATCTTCGAGACCATCTACCACGCCGCGCTCGAGGC 185325
Query 105349 GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408
|| || || | || | ||||||||| || || || | || || ||| |||||
Sbjct 185324 CAGCTCCGAACTCGCTGCTCGTGATGGTCCCTACGAGACTTGGGAAGGCAGTCCTGCTTC 185265
Query 105409 ACAAGG 105414
||||||
Sbjct 185264 ACAAGG 185259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583256265147280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |