Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq298 181 3e-40
seq433 170 6e-37
seq412 168 2e-36
>seq298
Length=714934
Score = 181 bits (200), Expect = 3e-40
Identities = 181/235 (77%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||| || || | | || || ||||| ||||||||||| || ||||| ||||
Sbjct 385409 TTTGCATACCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTAT 385350
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| ||||| | || || || ||||| || || || ||||||||||| |||||||||||||
Sbjct 385349 AGTCAGACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGAT 385290
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| || ||||| ||||| || || || || || || |||||||| | ||||| |
Sbjct 385289 CGGGAGGGATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAG 385230
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || ||||| || | ||||| ||||| || || || ||||| ||||||||
Sbjct 385229 ATTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175
Score = 149 bits (164), Expect = 2e-30
Identities = 174/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || ||||| ||||||||||| || ||||| || |
Sbjct 385637 TTTGCATACCACCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGT 385578
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || || || || || || ||||| ||||| ||||| || ||||
Sbjct 385577 AGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGAT 385518
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| ||||| || |||||||| || || || || || ||||| | ||||| |
Sbjct 385517 CGGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACG 385458
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || | |||||| || || || || || ||||| || |||||
Sbjct 385457 ACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403
Score = 147 bits (162), Expect = 7e-30
Identities = 158/208 (76%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| || ||||| ||| || ||||| || |||||||| | || ||||||||||| |
Sbjct 385837 CAAG-TGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
|||| || ||||||||||| || || || || || || ||||| || || || |||||||
Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || ||||| ||||| ||||| | ||||||| || ||||| || || | ||||| |
Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||| || || || || || || |||||
Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCAT 385631
>seq433
Length=1580550
Score = 170 bits (188), Expect = 6e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 140509 TACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAG 140568
|||||||||| | | |||||||| || || || ||||| || ||||| || |||||||
Sbjct 1108982 TACCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAG 1108923
Query 140569 ATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAG 140628
| | || || ||||||||||| ||||| || || ||||| ||||| || |||||||| |
Sbjct 1108922 AGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGG 1108863
Query 140629 GAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAA 140688
|||| ||||| ||||| ||||| ||||| || ||||| ||||| | || || | ||| |
Sbjct 1108862 GAATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGA 1108803
Query 140689 CTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || | ||||| || || || || || || || ||||||||
Sbjct 1108802 CCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| ||||| | | ||||||||||| || ||||||||||| || || || || ||
Sbjct 1108756 CATACCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTC 1108697
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || |||||||| || || || |||||||| ||||| |||||||| || |||||
Sbjct 1108696 AGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGG 1108637
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || || |||||||| || || || ||||||||||| | || |||| ||
Sbjct 1108636 AGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTC 1108577
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || | || | ||||| || || || || || || || ||||||||
Sbjct 1108576 CACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526
Score = 163 bits (180), Expect = 9e-35
Identities = 177/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| ||||| || | | |||||||| ||||| || ||||| || || ||||| |
Sbjct 1108304 TTTGCATTCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGT 1108245
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| ||||| | || |||||||| || || || |||||||| ||||| ||||||||||| |
Sbjct 1108244 AGTCAGACAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGT 1108185
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| || || || || ||||| || || ||||| || ||||| || | ||| || |
Sbjct 1108184 CGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAG 1108125
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || |||| ||||| || || || || || || || ||||||||
Sbjct 1108124 ACTCGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070
>seq412
Length=416704
Score = 168 bits (186), Expect = 2e-36
Identities = 453/690 (66%), Gaps = 2/690 (0%)
Strand=Plus/Plus
Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACC 350026
||||| || ||||||| || ||||| |||||||| || | || || |||||||||||
Sbjct 396209 CGTCGTCTCCGAACTGCTTGCGAACGCGCTAAGCGAACCCTCTCTTCCGCTACCCAAACC 396268
Query 350027 TCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCT 350086
|| || ||||| || ||||| ||||| | || || | | | || |||| |||||
Sbjct 396269 TCAATCGAAATCGACTCTCTGTTCGATGGTATTGACTTTTATACTTCCCTTACCCGTGCC 396328
Query 350087 CGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146
|| || || ||| | || ||||||||| || || | || || || || |||||
Sbjct 396329 CGTTTCGAGGAACTGTGCCAGGATCTTTTCCGAAGCACCCTCGAGCCCGTCGAGAAAGTC 396388
Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206
| || | || || ||| | | | | ||| | ||| | |||||||| ||
Sbjct 396389 CTTCGTGACTCTAAGATCGACAAGGCTAACGTCCACGAAATCGTTCTCGTTGGTGGCTCC 396448
Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTT-C 350265
|| ||||| || || || | | || || || || |||||||| || || |
Sbjct 396449 ACCCGTATCCCTCGTATTGTCAAGCTCGTTTCCGACTTCTTCAATGGCAAGGAGCCCAAC 396508
Query 350266 TAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTT 350325
||| || | || || ||||| || || || || |||||||| || || || |||| |
Sbjct 396509 AAGAGCA-TCAACCCCGATGAGGCCGTCGCCTACGGTGCTGCCGTCCAAGCTGCTATCCT 396567
Query 350326 ATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTC 350385
||||| ||| | || | | | || | | || || || || |||| || ||
Sbjct 396568 CTCTGGTGATACCTCTGAGAAGACTCAAGACTTGCTGCTCCTTGACGTTGCTCCTCTCTC 396627
Query 350386 GCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGT 350445
|| || | || || |||||| || ||||| | ||| || |||| | |||||
Sbjct 396628 CCTCGGTATCGAGACAGCTGGTGGTGTCATGACCGCTCTCATCAAGCGAAACACCACTGT 396687
Query 350446 ACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAAT 350505
||||| || |||||| ||| ||| || || | || || || || |||| || ||
Sbjct 396688 CCCTACCAAGAAGTCCGAAATTTTCTCCACCTACGCCGACAACCAACCAGGTGTGCTCAT 396747
Query 350506 TCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTAC 350565
|||||| | || ||||| ||||||||||| || || || || || || | ||
Sbjct 396748 TCAAGTCTACGAGGGTGAGCGTGCTCGCACCAAGGACAACAACTTGCTCGGCAAGTTCGA 396807
Query 350566 CCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATAT 350625
|| || || || || || | || |||||||| || |||||| | ||||||||
Sbjct 396808 GCTGTCTGGCATCCCTCCCGCTCCCCGTGGCGTTCCTCAAATCGAAGTCACCTTCGATAT 396867
Query 350626 TGATTCAAATGGTATTTTAAATGTTACCGC 350655
|||| | |||||||| || ||||| ||||
Sbjct 396868 TGATGCCAATGGTATCTTGAATGTCTCCGC 396897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515242324369466
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