Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq370 107 2e-18 >seq370 Length=376741 Score = 107 bits (118), Expect = 2e-18 Identities = 243/365 (67%), Gaps = 3/365 (1%) Strand=Plus/Minus Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATC 59828 || || |||||||| |||||||| | ||||| | | ||| | | ||| | | Sbjct 250050 GAAGTGCAGATTGCGGAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGTG 249991 Query 59829 CACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCT 59888 ||||||||| |||| || ||| | || || | | |||||||||| || || || Sbjct 249990 CACTCCGAGGCGTATTCCCTCCTAATTGACACTTACATCAAGGATCCTGACGAACGGGAC 249931 Query 59889 GGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATG 59948 ||| ||||| || || || || || | | || ||||| ||||||||||| || Sbjct 249930 TTTCTCTTCCGGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGCATTG 249871 Query 59949 CAGTGGATGAGTCCTGGAGCATC---ATTTGCACAACGTCTCATAGCTTTTGCATGCGTG 60005 | ||||| | | | |||| |||| | | || || | ||||| ||| ||| Sbjct 249870 AAATGGATTTCTACCGAGACATCCGCATTTTCGGAGCGGCTTGTTGCTTTCGCAGCAGTG 249811 Query 60006 GAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTC 60065 ||||| || || || || || || || ||| || || ||| | | |||||| || | Sbjct 249810 GAAGGCATTTTTTTTTCAGGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAGGATTG 249751 Query 60066 ATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAG 60125 ||||| || ||| ||||||||||||||| || || ||||||||| | ||| || Sbjct 249750 ATGCCAGGATTGACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATACCGAT 249691 Query 60126 TTTGC 60130 ||||| Sbjct 249690 TTTGC 249686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520535219680