Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq370 147 2e-30 seq415 91.5 2e-13 >seq370 Length=376741 Score = 147 bits (162), Expect = 2e-30 Identities = 348/525 (66%), Gaps = 12/525 (2%) Strand=Plus/Minus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || |||| ||||||||| | ||| || | || || || || | | ||| Sbjct 251825 GGCAAAATCGGTATGCATGCCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAGCC 251766 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| || ||||||||||||||||| ||||||| ||| || || |||||| || Sbjct 251765 GGGCATGAGACCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAAAT 251706 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGA------ACGGTGCATCGGAAGT 74923 ||| || ||| || ||||| || || |||| || | || | |||||| Sbjct 251705 GCCCTCCACAGCAGCGAAGGCAACTAGACGTTCGGCAAAGGTAGACTCTTTATCGGA--- 251649 Query 74924 CATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTG 74983 ||||| || ||||||| || ||||| |||| ||||| ||| || | || | Sbjct 251648 GATCCAGGTGAGAGCCCAGTCGGCTTTCTTCTTGATGCAAGGGATAGTGTCAACGGCGTC 251589 Query 74984 GAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGT 75043 ||||||| | | || |||| ||||||| | |||| || | || ||||| || Sbjct 251588 GAAGAGGTATTCGCGCTGGGCGGGGTCCTTGATGTAGGTGTCGATAAGCAGGGAGTATGT 251529 Query 75044 CTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAAT 75103 ||| ||||| || ||| | | ||| | | |||||| | || ||||| || Sbjct 251528 CTCTGAATGGATGTTCTCCATCATGATTTGGAAACCATAGAAACATCGTGCCTCAGCGGC 251469 Query 75104 CTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGC 75163 ||| || || || || || | ||| ||||| ||||||| || ||||||||||| Sbjct 251468 CTGGACTTCATTGGAGAAGCGCTCCACGAGGTTCTCGTTGACGATACCATCCGAGGCGGC 251409 Query 75164 GAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC---ATCGTCAGTGAGTTTGTCCCA 75220 ||| || || || || | ||| ||||| ||||| |||| | | | |||| ||| Sbjct 251408 GAAGAAGGCGAGGACATGTGAGATGAAGTGACGCTCGTTGTCGTTAAGGCGGTTGTTCCA 251349 Query 75221 ATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || | |||||| | | || ||||||||| | |||||||| Sbjct 251348 GTCATGAAGGTCCTTGGAGAGGTCCATCTCCTCGGCAGTCCAGAA 251304 Score = 91.5 bits (100), Expect = 2e-13 Identities = 303/465 (65%), Gaps = 11/465 (2%) Strand=Plus/Plus Query 74808 CCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAG 74867 || ||||| | ||| ||||| ||| ||||||||||||| ||||| || || || Sbjct 249743 CCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAA 249802 Query 74868 ATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA--CGG-TGCATCGGAAGTC 74924 |||||||| || || || || ||||| || | || || ||| || |||| || Sbjct 249803 ATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTCCGAAAATGCGGATGTCTCGGTAGAA 249862 Query 74925 ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984 ||||| || |||||||| || ||| | |||| | ||| | || |||||||| || Sbjct 249863 ATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGG 249922 Query 74985 AAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044 ||||| || || || |||||||||| | ||||||| | || || |||| | Sbjct 249923 AAGAGAAAGTCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATACGCC 249982 Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104 || || || | ||| | | || | | |||||| | || ||||| |||||| Sbjct 249983 TCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACAACGGGCCTCCGCAATC 250042 Query 75105 TGTACATCCTTTGAAAA--ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162 || || || | || || ||| | | ||||| |||| ||||| ||||| | || Sbjct 250043 TGCACTTCACTCGAGAAGCGTTC--CACAAGGTTCTCGTTGACAATGCCATCCGAAGAGG 250100 Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAAT 75222 | || || || || || | |||||||| || || || || || ||| | Sbjct 250101 CAAAGAACGCGAGAACGCGCGAAAGGAAGTGGCGTTCCGGATCTGTCAGGTTCATCCAGT 250160 Query 75223 CCTTCAGG--TCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || |||| || || || ||||| || ||||| |||||||| Sbjct 250161 CC--CAGGTATCATGCGATAAGTCAATTTCTTCGACAGTCCAGAA 250203 >seq415 Length=258813 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 || || ||||||||| |||| ||||| |||||||||||||| ||| |||||| || Sbjct 186510 TATTTCACGCACGCCTCGCCCACCCTCTTCAACGCTGGTACACCTCATCCTCAGTTGAGC 186451 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 ||||||||| || |||||||| || || ||||| || ||||| || || | ||| Sbjct 186450 TCCTGCTTCCTTGTCTGCATGAAGGAAGATTCCATCGAAGGTATCTATGATACCTTGAAG 186391 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 | |||||| ||| |||| | ||||| || ||| || || Sbjct 186390 AACTGTGCCATGATCAGCAAGACTGCTGGTGGAATTGGTCTCAAC 186346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547211745395600