Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq370 147 2e-30
seq415 91.5 2e-13
>seq370
Length=376741
Score = 147 bits (162), Expect = 2e-30
Identities = 348/525 (66%), Gaps = 12/525 (2%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || |||| ||||||||| | ||| || | || || || || | | |||
Sbjct 251825 GGCAAAATCGGTATGCATGCCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAGCC 251766
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| || ||||||||||||||||| ||||||| ||| || || |||||| ||
Sbjct 251765 GGGCATGAGACCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAAAT 251706
Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGA------ACGGTGCATCGGAAGT 74923
||| || ||| || ||||| || || |||| || | || | ||||||
Sbjct 251705 GCCCTCCACAGCAGCGAAGGCAACTAGACGTTCGGCAAAGGTAGACTCTTTATCGGA--- 251649
Query 74924 CATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTG 74983
||||| || ||||||| || ||||| |||| ||||| ||| || | || |
Sbjct 251648 GATCCAGGTGAGAGCCCAGTCGGCTTTCTTCTTGATGCAAGGGATAGTGTCAACGGCGTC 251589
Query 74984 GAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGT 75043
||||||| | | || |||| ||||||| | |||| || | || ||||| ||
Sbjct 251588 GAAGAGGTATTCGCGCTGGGCGGGGTCCTTGATGTAGGTGTCGATAAGCAGGGAGTATGT 251529
Query 75044 CTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAAT 75103
||| ||||| || ||| | | ||| | | |||||| | || ||||| ||
Sbjct 251528 CTCTGAATGGATGTTCTCCATCATGATTTGGAAACCATAGAAACATCGTGCCTCAGCGGC 251469
Query 75104 CTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGC 75163
||| || || || || || | ||| ||||| ||||||| || |||||||||||
Sbjct 251468 CTGGACTTCATTGGAGAAGCGCTCCACGAGGTTCTCGTTGACGATACCATCCGAGGCGGC 251409
Query 75164 GAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC---ATCGTCAGTGAGTTTGTCCCA 75220
||| || || || || | ||| ||||| ||||| |||| | | | |||| |||
Sbjct 251408 GAAGAAGGCGAGGACATGTGAGATGAAGTGACGCTCGTTGTCGTTAAGGCGGTTGTTCCA 251349
Query 75221 ATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265
|| | |||||| | | || ||||||||| | ||||||||
Sbjct 251348 GTCATGAAGGTCCTTGGAGAGGTCCATCTCCTCGGCAGTCCAGAA 251304
Score = 91.5 bits (100), Expect = 2e-13
Identities = 303/465 (65%), Gaps = 11/465 (2%)
Strand=Plus/Plus
Query 74808 CCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAG 74867
|| ||||| | ||| ||||| ||| ||||||||||||| ||||| || || ||
Sbjct 249743 CCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAA 249802
Query 74868 ATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA--CGG-TGCATCGGAAGTC 74924
|||||||| || || || || ||||| || | || || ||| || |||| ||
Sbjct 249803 ATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTCCGAAAATGCGGATGTCTCGGTAGAA 249862
Query 74925 ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984
||||| || |||||||| || ||| | |||| | ||| | || |||||||| ||
Sbjct 249863 ATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGG 249922
Query 74985 AAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044
||||| || || || |||||||||| | ||||||| | || || |||| |
Sbjct 249923 AAGAGAAAGTCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATACGCC 249982
Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104
|| || || | ||| | | || | | |||||| | || ||||| ||||||
Sbjct 249983 TCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACAACGGGCCTCCGCAATC 250042
Query 75105 TGTACATCCTTTGAAAA--ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162
|| || || | || || ||| | | ||||| |||| ||||| ||||| | ||
Sbjct 250043 TGCACTTCACTCGAGAAGCGTTC--CACAAGGTTCTCGTTGACAATGCCATCCGAAGAGG 250100
Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAAT 75222
| || || || || || | |||||||| || || || || || ||| |
Sbjct 250101 CAAAGAACGCGAGAACGCGCGAAAGGAAGTGGCGTTCCGGATCTGTCAGGTTCATCCAGT 250160
Query 75223 CCTTCAGG--TCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265
|| |||| || || || ||||| || ||||| ||||||||
Sbjct 250161 CC--CAGGTATCATGCGATAAGTCAATTTCTTCGACAGTCCAGAA 250203
>seq415
Length=258813
Score = 91.5 bits (100), Expect = 2e-13
Identities = 119/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
|| || ||||||||| |||| ||||| |||||||||||||| ||| |||||| ||
Sbjct 186510 TATTTCACGCACGCCTCGCCCACCCTCTTCAACGCTGGTACACCTCATCCTCAGTTGAGC 186451
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
||||||||| || |||||||| || || ||||| || ||||| || || | |||
Sbjct 186450 TCCTGCTTCCTTGTCTGCATGAAGGAAGATTCCATCGAAGGTATCTATGATACCTTGAAG 186391
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434
| |||||| ||| |||| | ||||| || ||| || ||
Sbjct 186390 AACTGTGCCATGATCAGCAAGACTGCTGGTGGAATTGGTCTCAAC 186346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547211745395600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |