Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq433 205 1e-47
seq298 185 1e-41
seq367 84.2 2e-11
seq353 84.2 2e-11
>seq433
Length=1580550
Score = 205 bits (226), Expect = 1e-47
Identities = 182/228 (80%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| |||||||| || || |||||||| || ||||| ||||| ||||||
Sbjct 1108297 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATC 1108356
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | ||| ||||||| || || ||||||||||| || || ||||| |||||
Sbjct 1108357 CGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 1108416
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||||| |||||||| || |||||||||||||||| ||||||||| | || |||||
Sbjct 1108417 ACAACGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATAA 1108476
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| || |||||||| || | ||||| || |||||
Sbjct 1108477 CATTCAGAAGGAATCGACCCTTCATCTCGTTCTTCGTCTCCGTGGTGG 1108524
Score = 178 bits (196), Expect = 1e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || |||||||| |||||||| || || |||||
Sbjct 1108070 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACTCTCGAAGTCGAGTCTTCC 1108129
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | || || || || |||||||||||||| || ||||| ||||||
Sbjct 1108130 GATACCATCGATAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 1108189
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || || ||||| ||||| |||||||||| || ||||| | ||||| |||
Sbjct 1108190 CAACGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGGCGCACCCTGTCTGACTACAAT 1108249
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| ||||| || || ||||| || || | ||||| || ||||||
Sbjct 1108250 ATCCAGAAGGAGTCAACCCTTCACCTTGTTCTCCGTCTGCGGGGTGGA 1108297
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||||||||| |||||||| || || | ||||| ||||||
Sbjct 1108526 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACCATCACGTTGGAGGTGGAGTCATCC 1108585
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || ||||||||||||||||| || ||||| |||||
Sbjct 1108586 GACACCATTGATAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAA 1108645
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || || ||||| ||||| || ||||||| || ||||| | ||||| ||
Sbjct 1108646 CAACGTCTGATCTTCGCTGGAAAGCAGCTAGAGGATGGGCGCACCCTCTCTGACTACAAC 1108705
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || ||||| || | || || || || ||
Sbjct 1108706 ATCCAGAAAGAGTCTACACTCCATCTTGTTCTTCGCCTCCGTGGCGG 1108752
Score = 107 bits (118), Expect = 2e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568
|||||||||||||||| || ||||| || || ||||| ||||| || ||||| | || |
Sbjct 1107945 GAATTCCTCCAGACCAACAACGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGGCGCA 1108004
Query 27569 CCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCG 27628
| || | || || ||| |||| |||||||||||||| ||||| ||| | ||||| || |
Sbjct 1108005 CTCTCTCGGATTACAATATCCAGAAGGAATCCACTCTACATCTCGTCCTTCGTCTGCGTG 1108064
Query 27629 GTGG 27632
||||
Sbjct 1108065 GTGG 1108068
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || |||||||||||||| || || |||||||||||
Sbjct 1107787 ATGCAAATCTTCGTAAAGACTCTCACCGGCAAGACTATCACCCTCGAGGTTGAGTCTTCC 1107846
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| | ||| | || | ||||| || || || |||||||||||
Sbjct 1107847 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGG 1107890
>seq298
Length=714934
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| ||||| ||||| |||||||| || || || ||||| ||||| |
Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || |||||||||||||| || ||||| || || ||
Sbjct 385463 GACACCATTGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCCGATCAA 385522
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| |||||||| | ||| ||||| | ||||| ||
Sbjct 385523 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 385582
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || ||||| ||||| ||| | ||||| || |||||
Sbjct 385583 ATTCAGAAGGAGTCTACTCTCCATCTCGTCCTCCGTCTCCGTGGTGG 385629
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || ||||| ||||| || || |||||||| || || |
Sbjct 385175 ATGCAGATCTTTGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAATCTTCT 385234
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||||| || || || || ||||| || || ||||| || |||
Sbjct 385235 GACACTATTGATAACGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCCTCCCGATCAG 385294
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || |||||||| ||||| ||||| || | ||| ||||| | ||||||||
Sbjct 385295 CAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTGTCTGACTATAAC 385354
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || ||||| ||||| ||| | ||||||||||| ||
Sbjct 385355 ATTCAGAAGGAGTCTACTCTCCATCTCGTCCTCCGTCTTCGCGGAGG 385401
Score = 159 bits (176), Expect = 4e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| |||||||||||||| || || || || || |||||| |
Sbjct 385631 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCT 385690
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | || || || ||||||||||||||||| ||||| || |||||
Sbjct 385691 GACACCATTGACAATGTCAAAGCGAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 385750
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||||||||| |||| || || || | || || ||
Sbjct 385751 CAGCGCCTTATCTTTGCTGGCAAGCAACTCGAAGATGGGCGCACTCTTTCTGATTACAAC 385810
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| || ||||| |||||| ||
Sbjct 385811 ATTCAGAAGGAGAGCACTCTCCA 385833
Score = 93.3 bits (102), Expect = 5e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| |||||||| |||||||||||
Sbjct 384897 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACCATTACTCTCGAGGTTGAGTCCTCG 384956
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|||| ||| | ||| | || || || || || |||||||||||
Sbjct 384957 GATACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAGGG 385000
>seq367
Length=894951
Score = 84.2 bits (92), Expect = 2e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568
|||| ||||| ||||||||||| | || || || || ||||| || ||||||| || |
Sbjct 540699 GAATCCCTCCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCA 540758
Query 27569 CCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627
|||| ||| ||||| || |||||||||| || || ||||| | || | ||||| ||
Sbjct 540759 CCCTCAGC-GACTACAACATCCAAAAGGAGTCTACCCTTCACTTGGTGCTCCGTCTCCGT 540817
Query 27628 GGTGG 27632
|||||
Sbjct 540818 GGTGG 540822
>seq353
Length=244416
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| ||||| || ||||| || || || ||||| |||||
Sbjct 156901 ATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACCATCACCCTCGAGGTGGAGTCTTCG 156960
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| | ||||| ||| | ||||| ||||| ||||||||||| ||
Sbjct 156961 GACACCATTGACAATGTCAAGGCCAAAATCCAGGACAAGGAAGG 157004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570305965836640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |