Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq433 205 1e-47 seq298 185 1e-41 seq367 84.2 2e-11 seq353 84.2 2e-11 >seq433 Length=1580550 Score = 205 bits (226), Expect = 1e-47 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| |||||||| || || |||||||| || ||||| ||||| |||||| Sbjct 1108297 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATC 1108356 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| ||||||| || || ||||||||||| || || ||||| ||||| Sbjct 1108357 CGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 1108416 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||||| |||||||| || |||||||||||||||| ||||||||| | || ||||| Sbjct 1108417 ACAACGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATAA 1108476 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || |||||||| || | ||||| || ||||| Sbjct 1108477 CATTCAGAAGGAATCGACCCTTCATCTCGTTCTTCGTCTCCGTGGTGG 1108524 Score = 178 bits (196), Expect = 1e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| |||||||| || || ||||| Sbjct 1108070 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACTCTCGAAGTCGAGTCTTCC 1108129 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | || || || || |||||||||||||| || ||||| |||||| Sbjct 1108130 GATACCATCGATAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 1108189 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || ||||| ||||| |||||||||| || ||||| | ||||| ||| Sbjct 1108190 CAACGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGGCGCACCCTGTCTGACTACAAT 1108249 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || || ||||| || || | ||||| || |||||| Sbjct 1108250 ATCCAGAAGGAGTCAACCCTTCACCTTGTTCTCCGTCTGCGGGGTGGA 1108297 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||||||||| |||||||| || || | ||||| |||||| Sbjct 1108526 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACCATCACGTTGGAGGTGGAGTCATCC 1108585 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||| || ||||||||||||||||| || ||||| ||||| Sbjct 1108586 GACACCATTGATAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAA 1108645 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || ||||| ||||| || ||||||| || ||||| | ||||| || Sbjct 1108646 CAACGTCTGATCTTCGCTGGAAAGCAGCTAGAGGATGGGCGCACCCTCTCTGACTACAAC 1108705 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || || ||||| || | || || || || || Sbjct 1108706 ATCCAGAAAGAGTCTACACTCCATCTTGTTCTTCGCCTCCGTGGCGG 1108752 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 |||||||||||||||| || ||||| || || ||||| ||||| || ||||| | || | Sbjct 1107945 GAATTCCTCCAGACCAACAACGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGGCGCA 1108004 Query 27569 CCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCG 27628 | || | || || ||| |||| |||||||||||||| ||||| ||| | ||||| || | Sbjct 1108005 CTCTCTCGGATTACAATATCCAGAAGGAATCCACTCTACATCTCGTCCTTCGTCTGCGTG 1108064 Query 27629 GTGG 27632 |||| Sbjct 1108065 GTGG 1108068 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || |||||||||||||| || || ||||||||||| Sbjct 1107787 ATGCAAATCTTCGTAAAGACTCTCACCGGCAAGACTATCACCCTCGAGGTTGAGTCTTCC 1107846 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | || | ||||| || || || ||||||||||| Sbjct 1107847 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGG 1107890 >seq298 Length=714934 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| ||||| |||||||| || || || ||||| ||||| | Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || |||||||||||||| || ||||| || || || Sbjct 385463 GACACCATTGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCCGATCAA 385522 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| |||||||| | ||| ||||| | ||||| || Sbjct 385523 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 385582 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| ||||| ||| | ||||| || ||||| Sbjct 385583 ATTCAGAAGGAGTCTACTCTCCATCTCGTCCTCCGTCTCCGTGGTGG 385629 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || ||||| ||||| || || |||||||| || || | Sbjct 385175 ATGCAGATCTTTGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAATCTTCT 385234 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| || || || || ||||| || || ||||| || ||| Sbjct 385235 GACACTATTGATAACGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCCTCCCGATCAG 385294 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || |||||||| ||||| ||||| || | ||| ||||| | |||||||| Sbjct 385295 CAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTGTCTGACTATAAC 385354 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| ||||| ||| | ||||||||||| || Sbjct 385355 ATTCAGAAGGAGTCTACTCTCCATCTCGTCCTCCGTCTTCGCGGAGG 385401 Score = 159 bits (176), Expect = 4e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| |||||||||||||| || || || || || |||||| | Sbjct 385631 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCT 385690 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || || || ||||||||||||||||| ||||| || ||||| Sbjct 385691 GACACCATTGACAATGTCAAAGCGAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 385750 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| ||||||||||| |||| || || || | || || || Sbjct 385751 CAGCGCCTTATCTTTGCTGGCAAGCAACTCGAAGATGGGCGCACTCTTTCTGATTACAAC 385810 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| |||||| || Sbjct 385811 ATTCAGAAGGAGAGCACTCTCCA 385833 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| |||||||| ||||||||||| Sbjct 384897 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACCATTACTCTCGAGGTTGAGTCCTCG 384956 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| ||| | ||| | || || || || || ||||||||||| Sbjct 384957 GATACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAGGG 385000 >seq367 Length=894951 Score = 84.2 bits (92), Expect = 2e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 |||| ||||| ||||||||||| | || || || || ||||| || ||||||| || | Sbjct 540699 GAATCCCTCCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCA 540758 Query 27569 CCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 |||| ||| ||||| || |||||||||| || || ||||| | || | ||||| || Sbjct 540759 CCCTCAGC-GACTACAACATCCAAAAGGAGTCTACCCTTCACTTGGTGCTCCGTCTCCGT 540817 Query 27628 GGTGG 27632 ||||| Sbjct 540818 GGTGG 540822 >seq353 Length=244416 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| || ||||| || || || ||||| ||||| Sbjct 156901 ATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACCATCACCCTCGAGGTGGAGTCTTCG 156960 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||||| ||| | ||||| ||||| ||||||||||| || Sbjct 156961 GACACCATTGACAATGTCAAGGCCAAAATCCAGGACAAGGAAGG 157004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570305965836640