Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq298 127 1e-24
>seq298
Length=714934
Score = 127 bits (140), Expect = 1e-24
Identities = 155/209 (74%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 34499 CCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAA 34558
|||| ||||||||||||||||| |||||||| ||||| ||||| || ||| | ||||| |
Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779
Query 34559 GTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGA 34618
|||| || || ||||| || | ||||||||||| || || | ||||||||||| |||
Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTC-CTGA 385720
Query 34619 TCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677
|| | ||| || | ||| ||||| ||| ||||||| ||| || || ||
Sbjct 385719 ATCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTG 385660
Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| | || ||||| || || |||||
Sbjct 385659 CCGGTAAGGGTCTTCACGAAGATTTGCAT 385631
Score = 104 bits (114), Expect = 1e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | ||||||||| |||||| ||||||||||| || ||
Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| || || || || ||||| || | ||| || || || || ||
Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || ||||| ||| |||| || | || ||| || ||| ||||| |||||
Sbjct 385281 ATGCCTTCCTTATCTTGGATC-TTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCAC 385223
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| | ||| ||||| || ||||| | || || ||||| |||||||||
Sbjct 385222 CTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCATG 385174
Score = 86.0 bits (94), Expect = 4e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||| || || |||||| |||||||| ||||| ||||| |||||
Sbjct 385164 AGACGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAAAGAGTTCGG 385105
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||||||| ||||| || || || || || || ||||||||||| |||||
Sbjct 385104 CCGTCTTCGAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCAGGCGG 385055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727214152926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |