Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq433 122 6e-23
seq298 102 6e-17
>seq433
Length=1580550
Score = 122 bits (134), Expect = 6e-23
Identities = 150/202 (74%), Gaps = 10/202 (5%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||||||||| || || || |
Sbjct 1108754 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAATCTTCC 1108813
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || ||| || || |||||| | || || |||||
Sbjct 1108814 GACACAATTGACAATGTGAAGGC-TAAGATTCAAGATAAGGAAGGTATTCCCCCTGATCA 1108872
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATT 23785
||||||| | || || ||||||||||| || ||||| || |||| || | ||||
Sbjct 1108873 ACAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGTCGTACGCTCTCT----GATT 1108928
Query 23786 ACAACATACAAAAAGAGTCCAC 23807
||||||| || || ||||||||
Sbjct 1108929 ACAACATTCAGAAGGAGTCCAC 1108950
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || ||||| || |||||||| || || || ||||||||||| || || || |
Sbjct 1108297 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATC 1108356
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | || | || | | ||||| ||||| | || || || |
Sbjct 1108357 CGACACCATCGACAATGTGAAGGCCAAGA-TCCAGGACAAGGAAGGCATCCCTCCTGACC 1108415
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| ||| | || ||||||||||| ||||| || || | || || | |||||| |
Sbjct 1108416 AACAACGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATA 1108475
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820
|||| || || || || || | ||| | |||
Sbjct 1108476 ACATTCAGAAGGAATCGACCCTTCATCTCGTT 1108507
>seq298
Length=714934
Score = 102 bits (112), Expect = 6e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || ||||| || || || || ||||| || ||||| || || |
Sbjct 385631 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCT 385690
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | || | || ||||| || ||| | || || || ||
Sbjct 385691 GACACCATTGACAATGTCAAAGCGAAGA-TTCAGGACAAGGAGGGTATTCCCCCCGACCA 385749
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| ||||| ||||| ||||| | |||||| | ||||||||
Sbjct 385750 ACAGCGCCTTATCTTTGCTGGCAAGCAACTCGAAGATGGGCGCACTCTTTCTGATTACAA 385809
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 385810 CATTCAGAAGGAG 385822
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || || || || || || ||||| ||||| || || || |
Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| || |||| | || | || ||||| ||||| | || || |||||
Sbjct 385463 GACACCATTGACAACGTTAAGGCGAAGA-TTCAGGACAAGGAAGGCATTCCCCCCGATCA 385521
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || || || ||||| || || || |||| ||||| | ||| |||||
Sbjct 385522 ACAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAA 385581
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 385582 CATTCAGAAGGAGTCTAC 385599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007037675976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |