Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq433 122 6e-23 seq298 102 6e-17 >seq433 Length=1580550 Score = 122 bits (134), Expect = 6e-23 Identities = 150/202 (74%), Gaps = 10/202 (5%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||||||||| || || || | Sbjct 1108754 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAATCTTCC 1108813 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || ||| || || |||||| | || || ||||| Sbjct 1108814 GACACAATTGACAATGTGAAGGC-TAAGATTCAAGATAAGGAAGGTATTCCCCCTGATCA 1108872 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATT 23785 ||||||| | || || ||||||||||| || ||||| || |||| || | |||| Sbjct 1108873 ACAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGTCGTACGCTCTCT----GATT 1108928 Query 23786 ACAACATACAAAAAGAGTCCAC 23807 ||||||| || || |||||||| Sbjct 1108929 ACAACATTCAGAAGGAGTCCAC 1108950 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || |||||||| || || || ||||||||||| || || || | Sbjct 1108297 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATC 1108356 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | || | || | | ||||| ||||| | || || || | Sbjct 1108357 CGACACCATCGACAATGTGAAGGCCAAGA-TCCAGGACAAGGAAGGCATCCCTCCTGACC 1108415 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| ||| | || ||||||||||| ||||| || || | || || | |||||| | Sbjct 1108416 AACAACGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATA 1108475 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| || || || || || | ||| | ||| Sbjct 1108476 ACATTCAGAAGGAATCGACCCTTCATCTCGTT 1108507 >seq298 Length=714934 Score = 102 bits (112), Expect = 6e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||||| || || || || ||||| || ||||| || || | Sbjct 385631 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCT 385690 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | || ||||| || ||| | || || || || Sbjct 385691 GACACCATTGACAATGTCAAAGCGAAGA-TTCAGGACAAGGAGGGTATTCCCCCCGACCA 385749 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| ||||| ||||| ||||| | |||||| | |||||||| Sbjct 385750 ACAGCGCCTTATCTTTGCTGGCAAGCAACTCGAAGATGGGCGCACTCTTTCTGATTACAA 385809 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 385810 CATTCAGAAGGAG 385822 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || || || || || || ||||| ||||| || || || | Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || |||| | || | || ||||| ||||| | || || ||||| Sbjct 385463 GACACCATTGACAACGTTAAGGCGAAGA-TTCAGGACAAGGAAGGCATTCCCCCCGATCA 385521 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || || || ||||| || || || |||| ||||| | ||| ||||| Sbjct 385522 ACAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAA 385581 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 385582 CATTCAGAAGGAGTCTAC 385599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007037675976