Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq433 152 1e-31
seq298 134 3e-26
seq292 96.9 8e-15
seq117 89.7 1e-12
>seq433
Length=1580550
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||| ||||| || || ||||| |||| ||||| || | | || | ||||||
Sbjct 1108737 AGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCC 1108678
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
||||||||||| ||||||||||| || ||||||||||| || || || || ||||||||
Sbjct 1108677 TCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCC 1108618
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| ||| || |||||||| || | ||||| || |||||||| |||
Sbjct 1108617 TGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTC 1108558
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||| | || || | ||| | |||||
Sbjct 1108557 TTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||||||||| ||||| || || || | |||||||| | | || | ||||||
Sbjct 1108965 AGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCT 1108906
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || ||||||||||| || ||||| || || |||||||||||||| |||
Sbjct 1108905 TCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCT 1108846
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||||||| || || ||||| || | ||| || || | ||||| |||
Sbjct 1108845 TGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTC 1108786
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | ||| | |||||
Sbjct 1108785 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| |||||||| || || || || || |||| |||||| || | || || | ||||||
Sbjct 1108281 AGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCC 1108222
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || ||||| |||||||| || || || ||||||||
Sbjct 1108221 TCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 1108162
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || || |||||||| || || | || || || | || || |||
Sbjct 1108161 TGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGACTTCGAGAGTAATGGTC 1108102
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||| | || || | ||| | |||||
Sbjct 1108101 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || || || || || ||||| || || | || ||||||| | || | |||||
Sbjct 1108509 AGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCC 1108450
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || || || || || ||||||||||| || || || |||||||||||
Sbjct 1108449 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCC 1108390
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| || | || || || | ||||| |||
Sbjct 1108389 TGGATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTC 1108330
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || | || || | ||| | |||||||
Sbjct 1108329 TTGCCAGTGAGGGTCTTGACGAAGATTTGCATT 1108297
Score = 107 bits (118), Expect = 5e-18
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || || ||||||||||| || |||| ||||||||| | | ||| | ||| ||
Sbjct 1108053 AGGACGAGATGTAGAGTGGATTCCTTCTGGATATTGTAATCCGAGAGAGTGCGCCCGTCC 1107994
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608
|| |||||||| |||||||||||||| ||||||||||| || |||||
Sbjct 1107993 TCAAGCTGCTTGCCAGCGAAGATAAGACGTTGTTGGTCTGGAGGAAT 1107947
>seq298
Length=714934
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
|||||||||| || || || | |||||||| | | ||| | ||||||||| || ||
Sbjct 385834 GTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTG 385775
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| ||||| |||||||| || ||||||||||| |||||||| |||||||| || |||||
Sbjct 385774 CTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTT 385715
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||| || |||||||| || | || || || | ||||| |||||||| ||
Sbjct 385714 CGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGT 385655
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
| || || | ||| | ||||||
Sbjct 385654 AAGGGTCTTCACGAAGATTTGCAT 385631
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||||| || |||||||| || || || || | || || || | || ||
Sbjct 385395 CGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTG 385336
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || ||||| |||||||| ||||| |||||||| ||||| || ||||| || || |||
Sbjct 385335 CGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCT 385276
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||| ||||||||||| |||||| || || ||||| || | |||||| || |
Sbjct 385275 TCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGG 385216
Query 225673 GTGATCGTCTTGCCCGT 225689
||||||||||| || ||
Sbjct 385215 GTGATCGTCTTCCCGGT 385199
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || |||||||| || || || || | ||||| |||| | || | || ||
Sbjct 385614 AGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCC 385555
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || ||||| ||||| ||||| |||||||||||
Sbjct 385554 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCC 385495
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || || |||||||| || | || || || | ||||| |||
Sbjct 385494 TGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTC 385435
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| || | || | ||||||
Sbjct 385434 TTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403
>seq292
Length=6532
Score = 96.9 bits (106), Expect = 8e-15
Identities = 84/103 (82%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732
||||| |||||||| || || |||| |||||||| | || ||||| ||||| || | |
Sbjct 831 TCAGGGTGACCAAAGAACCAAAATAGGTGTTGATATAATATTGGATCTCCTCCTCCAGCT 772
Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774
|||||| |||| ||||||||||| |||||||| ||||| ||||
Sbjct 771 GGATCATAAAAACTAGTATTAAAGTTTCTATCTGTTAATAACA 729
Score = 91.5 bits (100), Expect = 4e-13
Identities = 191/285 (67%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500
|| ||||||||||| ||| || ||| |||| || |||||||| |||||| | |
Sbjct 149 ACTTTATATTTAATTTTTTCTGTATTTGCTGGAATGATAGGTACAGCCTTTTCTGTATTA 208
Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560
|| || ||||||||| | ||| || ||| | || ||| || ||| | |
Sbjct 209 ATTAGATTAGAATTATCAAGTCCAGGAGTACAATTTTTACAAGGTGATCACCAGTTATTT 268
Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620
|| || || || | || ||||| ||| | ||||| || ||| | || ||||| | | |
Sbjct 269 AATGTAATAATATCAGCTCATGCATTTATAATGATATTTTTTATGGTAATGCCTGGTTTA 328
Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680
|||| || || || || | || | || || ||| ||||||||||||||||
Sbjct 329 GTAGGGGGATTTGGTAACTATTTTTTACCAATACACTGTGGAAGTCCTGATATGGCTTTT 388
Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725
|| || || || ||||| ||||| ||| |||| ||||| |||
Sbjct 389 CCTAGACTAAATAATATCTCATTTTGGTTATTACCACCTTCATTA 433
>seq117
Length=34262
Score = 89.7 bits (98), Expect = 1e-12
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 225514 AGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTC 225573
||||||||| | | || | || ||||| | || ||| | ||||||| | ||| |
Sbjct 15442 AGAGTGGATCCCCTCTGTATGTTATAATCCGACATCGTTTTATCATCTTCCAACTGTCTT 15501
Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633
||||| || |||||||||||||| |||||||| ||||| || ||||||| ||| |
Sbjct 15502 CCAGCAAAAATAAGTCGTTGTTGATCGGGCGGGATACCCTCGCTGTCTTGAATCATGGAT 15561
Query 225634 TTCACAGCTTCGATGGTGTCTGAG 225657
|||| | |||| ||||||||||
Sbjct 15562 TTCAAATGGTCGACGGTGTCTGAG 15585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192521696271668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |