Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq433 152 1e-31 seq298 134 3e-26 seq292 96.9 8e-15 seq117 89.7 1e-12 >seq433 Length=1580550 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| ||||| || || ||||| |||| ||||| || | | || | |||||| Sbjct 1108737 AGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCC 1108678 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| ||||||||||| || ||||||||||| || || || || |||||||| Sbjct 1108677 TCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCC 1108618 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| || |||||||| || | ||||| || |||||||| ||| Sbjct 1108617 TGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTC 1108558 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || | ||| | ||||| Sbjct 1108557 TTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||||| || || || | |||||||| | | || | |||||| Sbjct 1108965 AGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCT 1108906 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || ||||||||||| || ||||| || || |||||||||||||| ||| Sbjct 1108905 TCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCT 1108846 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| || || ||||| || | ||| || || | ||||| ||| Sbjct 1108845 TGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTC 1108786 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 1108785 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || || || || |||| |||||| || | || || | |||||| Sbjct 1108281 AGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCC 1108222 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || ||||| |||||||| || || || |||||||| Sbjct 1108221 TCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 1108162 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || || |||||||| || || | || || || | || || ||| Sbjct 1108161 TGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGACTTCGAGAGTAATGGTC 1108102 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || | ||| | ||||| Sbjct 1108101 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || || || ||||| || || | || ||||||| | || | ||||| Sbjct 1108509 AGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCC 1108450 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || || || || ||||||||||| || || || ||||||||||| Sbjct 1108449 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCC 1108390 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| || | || || || | ||||| ||| Sbjct 1108389 TGGATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTC 1108330 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | || || | ||| | ||||||| Sbjct 1108329 TTGCCAGTGAGGGTCTTGACGAAGATTTGCATT 1108297 Score = 107 bits (118), Expect = 5e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || ||||||||||| || |||| ||||||||| | | ||| | ||| || Sbjct 1108053 AGGACGAGATGTAGAGTGGATTCCTTCTGGATATTGTAATCCGAGAGAGTGCGCCCGTCC 1107994 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || |||||||| |||||||||||||| ||||||||||| || ||||| Sbjct 1107993 TCAAGCTGCTTGCCAGCGAAGATAAGACGTTGTTGGTCTGGAGGAAT 1107947 >seq298 Length=714934 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 |||||||||| || || || | |||||||| | | ||| | ||||||||| || || Sbjct 385834 GTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTG 385775 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| ||||| |||||||| || ||||||||||| |||||||| |||||||| || ||||| Sbjct 385774 CTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTT 385715 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||| || |||||||| || | || || || | ||||| |||||||| || Sbjct 385714 CGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGT 385655 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | || || | ||| | |||||| Sbjct 385654 AAGGGTCTTCACGAAGATTTGCAT 385631 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || |||||||| || || || || | || || || | || || Sbjct 385395 CGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTG 385336 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| |||||||| ||||| |||||||| ||||| || ||||| || || ||| Sbjct 385335 CGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCT 385276 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| ||||||||||| |||||| || || ||||| || | |||||| || | Sbjct 385275 TCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGG 385216 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||||||||| || || Sbjct 385215 GTGATCGTCTTCCCGGT 385199 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || |||||||| || || || || | ||||| |||| | || | || || Sbjct 385614 AGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCC 385555 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || ||||| ||||| ||||| ||||||||||| Sbjct 385554 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCC 385495 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || || |||||||| || | || || || | ||||| ||| Sbjct 385494 TGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTC 385435 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | || | |||||| Sbjct 385434 TTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403 >seq292 Length=6532 Score = 96.9 bits (106), Expect = 8e-15 Identities = 84/103 (82%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 ||||| |||||||| || || |||| |||||||| | || ||||| ||||| || | | Sbjct 831 TCAGGGTGACCAAAGAACCAAAATAGGTGTTGATATAATATTGGATCTCCTCCTCCAGCT 772 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 |||||| |||| ||||||||||| |||||||| ||||| |||| Sbjct 771 GGATCATAAAAACTAGTATTAAAGTTTCTATCTGTTAATAACA 729 Score = 91.5 bits (100), Expect = 4e-13 Identities = 191/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||||||||| ||| || ||| |||| || |||||||| |||||| | | Sbjct 149 ACTTTATATTTAATTTTTTCTGTATTTGCTGGAATGATAGGTACAGCCTTTTCTGTATTA 208 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 || || ||||||||| | ||| || ||| | || ||| || ||| | | Sbjct 209 ATTAGATTAGAATTATCAAGTCCAGGAGTACAATTTTTACAAGGTGATCACCAGTTATTT 268 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || || || || | || ||||| ||| | ||||| || ||| | || ||||| | | | Sbjct 269 AATGTAATAATATCAGCTCATGCATTTATAATGATATTTTTTATGGTAATGCCTGGTTTA 328 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 |||| || || || || | || | || || ||| |||||||||||||||| Sbjct 329 GTAGGGGGATTTGGTAACTATTTTTTACCAATACACTGTGGAAGTCCTGATATGGCTTTT 388 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 || || || || ||||| ||||| ||| |||| ||||| ||| Sbjct 389 CCTAGACTAAATAATATCTCATTTTGGTTATTACCACCTTCATTA 433 >seq117 Length=34262 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 225514 AGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTC 225573 ||||||||| | | || | || ||||| | || ||| | ||||||| | ||| | Sbjct 15442 AGAGTGGATCCCCTCTGTATGTTATAATCCGACATCGTTTTATCATCTTCCAACTGTCTT 15501 Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| || |||||||||||||| |||||||| ||||| || ||||||| ||| | Sbjct 15502 CCAGCAAAAATAAGTCGTTGTTGATCGGGCGGGATACCCTCGCTGTCTTGAATCATGGAT 15561 Query 225634 TTCACAGCTTCGATGGTGTCTGAG 225657 |||| | |||| |||||||||| Sbjct 15562 TTCAAATGGTCGACGGTGTCTGAG 15585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192521696271668