Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq406 87.8 1e-12 seq98 84.2 2e-11 >seq406 Length=30602 Score = 87.8 bits (96), Expect = 1e-12 Identities = 152/217 (70%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| || | ||| ||||| || || || ||||| | || |||||| ||| || | | Sbjct 14846 CGAAGTGTCGCCATTGGAAGCCATATACGGGTCCTAAATCGCCCTCTCACCTATGACCCA 14905 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 || ||||| |||||||| ||| | || ||||| ||||||||||||| || ||||||| Sbjct 14906 GCCCTCTCTTCTCCAAAAACTCTTTCGAGCCGTTCACGTCCCAGATCTTGACGCCCTTCT 14965 Query 30135 CGGAGAGC-TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193 | || ||| ||| | | | |||| | || ||||| |||||||| || | ||| Sbjct 14966 CAGAAAGCAGCTTCGAATCGATTCGACCAT-GCACAAACCATAGCAGCTCTTCAATAACG 15024 Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 | | |||| ||| || ||||| || || |||| Sbjct 15025 CCACGCAAAAACGTCCTGTT-GTCGTCAGAAGAGGAA 15060 >seq98 Length=51396 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || | ||| ||||| || || || ||||| | || |||||| |||||| | | Sbjct 20761 AAGTGTCGCCATTGGAAGCCATATACGGGTCCTAAATCGCCCTCTCGCCTGTGACCCAGC 20702 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || ||||| |||||||| || | || ||||| | ||||||||||| || || ||||| Sbjct 20701 CCTCTCTTCTCCAAAAACTCCTTCGAGCCGTTCCCATCCCAGATCTTGACGCCTTTCTCC 20642 Query 30137 GAGAGCTCTTTGGAGTTTG-TGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30195 || ||| ||| || | | | |||| | || ||||| |||||||| || | | | | Sbjct 20641 GAAAGCAGTTTCGAATCGGTTCGACCAT-GCACAAACCATAGCAGCTCTTCAATAATGCC 20583 Query 30196 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 |||| |||||| ||||| || || |||| Sbjct 20582 ACGTAAAAACGTCCTCTTTGTCGTCAGAAGAGGAA 20548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406160121029092