Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq406 104 2e-17 seq98 102 6e-17 >seq406 Length=30602 Score = 104 bits (114), Expect = 2e-17 Identities = 235/347 (68%), Gaps = 5/347 (1%) Strand=Plus/Plus Query 27380 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 27439 ||||||||||||| |||| || ||| || | |||||| ||| || || |||| | Sbjct 14717 CTTTGGGGTTCCAAGCGCTCATGATAATCCTCCTGTCGGTTGGATTCGTCTTGATTTTCT 14776 Query 27440 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGTG 27498 | | | | ||||| | || ||| | |||||||| || | || | | Sbjct 14777 CGATACATTCGCGTAGCTGGTTGACACCCTGGTCAGAGTAGTCGTAGTCGCAAC-CGGCA 14835 Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || || |||||||| || | ||||||||| || || || ||||| | || |||||| | Sbjct 14836 TATTCAGCTCCGAAGTGTCGCCATTGGAAGCCATATACGGGTCCTAAATCGCCCTCTCAC 14895 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 || || | | || ||||| |||||||| ||| | || ||||| ||||||||||||| Sbjct 14896 CTATGACCCAGCCCTCTCTTCTCCAAAAACTCTTTCGAGCCGTTCACGTCCCAGATCTTG 14955 Query 27619 ACCCCCTTCTCGGAGAGC-TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 27677 || |||||||| || ||| ||| | | | |||| | || ||||| |||||||| Sbjct 14956 ACGCCCTTCTCAGAAAGCAGCTTCGAATCGATTCGACCAT-GCACAAACCATAGCAGCTC 15014 Query 27678 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724 || | ||| | | |||| ||| || ||||| || || |||| Sbjct 15015 TTCAATAACGCCACGCAAAAACGTCCTGTT-GTCGTCAGAAGAGGAA 15060 >seq98 Length=51396 Score = 102 bits (112), Expect = 6e-17 Identities = 234/347 (67%), Gaps = 4/347 (1%) Strand=Plus/Minus Query 27380 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 27439 ||||||||||||| |||| || ||| || | |||||| ||| || || |||| | Sbjct 20892 CTTTGGGGTTCCAAGCGCTCATGATAATTCTCCTGTCGGTTGGATTCGTCTTGATTTTCT 20833 Query 27440 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGTG 27498 | | | || || || || || ||| || |||||||| | | || ||| Sbjct 20832 CGATACATTCGTGTAGTTGGTCGACGCCCTGGCCAGAGTAGTCATGGTCGCA-GTCGACA 20774 Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || || | ||| || || | ||||||||| || || || ||||| | || |||||| | Sbjct 20773 TATTCAGTTCCAAAGTGTCGCCATTGGAAGCCATATACGGGTCCTAAATCGCCCTCTCGC 20714 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 ||||| | | || ||||| |||||||| || | || ||||| | ||||||||||| Sbjct 20713 CTGTGACCCAGCCCTCTCTTCTCCAAAAACTCCTTCGAGCCGTTCCCATCCCAGATCTTG 20654 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTG-TGGACCCTCTGACGAACCACAGCAGCTC 27677 || || ||||| || ||| ||| || | | | |||| | || ||||| |||||||| Sbjct 20653 ACGCCTTTCTCCGAAAGCAGTTTCGAATCGGTTCGACCAT-GCACAAACCATAGCAGCTC 20595 Query 27678 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724 || | | | | |||| |||||| ||||| || || |||| Sbjct 20594 TTCAATAATGCCACGTAAAAACGTCCTCTTTGTCGTCAGAAGAGGAA 20548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369504398904482