Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq433 131 4e-25 seq298 111 4e-19 >seq433 Length=1580550 Score = 131 bits (144), Expect = 4e-25 Identities = 159/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| ||||| || ||||| || ||||| ||||| || | | || | |||||| Sbjct 1108282 GAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATC 1108223 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| || |||||||| || | |||||||| | | ||| || ||||| Sbjct 1108222 CTCGAGCTGCTTT--CCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTG 1108165 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || |||||| | || | | | || ||| ||| ||||| |||||||| Sbjct 1108164 TCCTGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGACTTCGAGAGTAATG 1108105 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||||||||| ||||| ||||||| |||||| Sbjct 1108104 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070 Score = 123 bits (136), Expect = 6e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| || ||||||||||| ||||||||||| || | | || | |||||| Sbjct 1108737 AGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCC 1108678 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 ||||| ||||| || |||||||| || | || ||||| | | ||| || ||||| | Sbjct 1108677 TCTAGCTGCTTT--CCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGT 1108620 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || |||||| | || | | |||| || ||| || || | || || | Sbjct 1108619 CCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGG 1108560 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | |||||||| || ||||| ||||||| |||||| Sbjct 1108559 TCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || || || ||||| || || ||||||||||| | | || | |||||| Sbjct 1108965 AGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCT 1108906 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| |||||||||||||| | ||| || || | | || |||||||| ||| Sbjct 1108905 TCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCT 1108846 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | |||| ||| || || || ||||| || || Sbjct 1108845 TGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTC 1108786 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 1108785 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 >seq298 Length=714934 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||| || || ||||||||||| | | ||| | ||||||||| | Sbjct 385837 CAAG-TGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || |||||||| | ||| ||||| | | || || ||||| || |||| Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| | || | | |||| || ||| ||||| || || || || |||| Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||||||||||| ||||| Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCAT 385631 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||||||||| || || |||||||| |||| | || | Sbjct 385621 GAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCG 385562 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | ||| || || | | || ||||| Sbjct 385561 ACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTC 385502 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || || || | || | | |||| || ||| || || || || Sbjct 385501 CTTGTCCTGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGT 385442 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||||||||| |||| ||||| Sbjct 385441 GATTGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| ||||||||||| || || ||||| || || | | || | || || Sbjct 385387 GAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTC 385328 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || || || |||||||| | ||||| || | | ||| |||||||| || Sbjct 385327 TTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATC 385268 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || || | || | |||| ||| || || ||||| || || || Sbjct 385267 TTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGT 385208 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || |||| |||||| Sbjct 385207 CTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153811604769362