Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq433 179 8e-40 seq298 152 1e-31 seq370 98.7 2e-15 seq367 84.2 5e-11 >seq433 Length=1580550 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| || || || || || | || || || ||||| |||||||||| Sbjct 1108296 CCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGAC 1108237 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || || || ||||||| |||||| ||||| || Sbjct 1108236 AGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGG 1108177 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| ||||| ||| ||||||| || || |||| |||||| Sbjct 1108176 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGACT 1108117 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| || ||||| ||||| | ||||| ||||| |||||||| Sbjct 1108116 TCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| |||||||| || ||||| | || ||||| |||||||||||||||| Sbjct 1108753 ACCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGA 1108694 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||||||||| || || || || ||||||| ||||||||||||| || Sbjct 1108693 GAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGG 1108634 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| || || || |||| || ||||| || | || || Sbjct 1108633 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCAC 1108574 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 1108573 CTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| || || || |||||||| |||| Sbjct 1108981 ACCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 1108922 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| || ||||| || || ||||| ||||| ||||| | ||| ||||| ||| || Sbjct 1108921 GAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGG 1108862 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||| ||||| ||||| || || || | || || ||||| |||| |||||| Sbjct 1108861 AATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGAC 1108802 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 1108801 CTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || ||||| | || ||| || || ||||| || || | Sbjct 1108524 CCACCACGGAGACGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAG 1108465 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| ||||| || |||||||| || | ||||||||||||| || Sbjct 1108464 AGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGG 1108405 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| || || || | ||||| ||||| || | ||||| Sbjct 1108404 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACC 1108345 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||||||||| ||||| || || | ||||| ||||| || |||||| Sbjct 1108344 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATT 1108297 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| || || ||| | ||||| ||||| |||| || || ||| Sbjct 1107890 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCG 1107831 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 1107830 AGGGTGATAGTCTTGCCGGTGAGAGTCTTTACGAAGATTTGCAT 1107787 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| ||||| || ||||||| ||| ||| || ||||| ||||| || | Sbjct 1108068 CCACCACGCAGACGAAGGACGAGATGTAGAGTGGATTCCTTCTGGATATTGTAATCCGAG 1108009 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || ||||| || ||||| || || || || || ||||| | |||||||||||| Sbjct 1108008 AGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGTTGGTC 1107956 >seq298 Length=714934 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| || || || |||||||| |||| ||| ||||| ||||| || ||||| || || Sbjct 385827 GTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTGCTTGCCA 385768 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 |||||||| | || |||||||| ||||||||||||||||| || ||||| ||||| Sbjct 385767 GCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTCGCTTTG 385708 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | || || ||||| || | |||||||| || ||||| ||||| || || | ||| Sbjct 385707 ACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGTAAGGGTC 385648 Query 283083 TTAACGAATATCTGCAT 283099 || ||||| || ||||| Sbjct 385647 TTCACGAAGATTTGCAT 385631 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || || || || ||||| | || || || || ||||| ||||||| Sbjct 385402 ACCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGA 385343 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || || || || || || || |||||||| | |||||| || || || Sbjct 385342 CAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGG 385283 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| ||||||||||| || || ||| |||| |||||||| |||| ||| || Sbjct 385282 GATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCAC 385223 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || | ||||| || || |||||||| Sbjct 385222 CTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | || || || || ||||||||||| | Sbjct 385630 ACCACCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 385571 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||| | ||| ||||| || || Sbjct 385570 GAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGG 385511 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| || || ||| | || || ||||| || | ||||| Sbjct 385510 AATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGAC 385451 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||| || || || ||||| Sbjct 385450 CTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| ||||| || | ||||| || ||||| | || || ||| Sbjct 385000 CCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTATCCGAGGACTCAACCTCG 384941 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || ||||| || || | ||||| || || |||||||| Sbjct 384940 AGAGTAATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 384897 >seq370 Length=376741 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || || |||||||| | ||| | ||| | |||||||| || || || ||||| || | Sbjct 251996 CTCATTGGCATGAACTCCGATTTGATGTGCCAATATATTGAGTTTGTTGCTGACCGACTG 252055 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| | || || | |||||||| || ||| |||||| |||| || ||||| Sbjct 252056 CTCGTCTCTCTTGGCAATGAGAAAGTCTACAACAAGTCGAACCCTTTCGACTTCATGGAT 252115 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTAT 230396 | |||||| | ||||| || ||||||||||| |||||||| ||| |||||| Sbjct 252116 ATGATTTCATTGCAGGGCAAGACTAACTTCTTTGAAAAGCGAGTCTCTGATTAT 252169 >seq367 Length=894951 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || || ||||||||||||||||| Sbjct 540823 ACCACCACGGAGACGGAGCACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGCT 540764 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || |||||||||||||| || || || ||||| |||||||| || || ||||| Sbjct 540763 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTC 540710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046730858142788