Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq433 179 8e-40
seq298 152 1e-31
seq370 98.7 2e-15
seq367 84.2 5e-11
>seq433
Length=1580550
Score = 179 bits (198), Expect = 8e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| ||||| || || || || || | || || || ||||| ||||||||||
Sbjct 1108296 CCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGAC 1108237
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| |||||||| || || || || || ||||||| |||||| ||||| ||
Sbjct 1108236 AGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGG 1108177
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| ||||| ||| ||||||| || || |||| ||||||
Sbjct 1108176 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGACT 1108117
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||||| || ||||| ||||| | ||||| ||||| ||||||||
Sbjct 1108116 TCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| |||||||| || ||||| | || ||||| ||||||||||||||||
Sbjct 1108753 ACCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGA 1108694
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| ||||||||||| || || || || ||||||| ||||||||||||| ||
Sbjct 1108693 GAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGG 1108634
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| || || || |||| || ||||| || | || ||
Sbjct 1108633 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCAC 1108574
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 1108573 CTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | ||| || || || |||||||| ||||
Sbjct 1108981 ACCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 1108922
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| || ||||| || || ||||| ||||| ||||| | ||| ||||| ||| ||
Sbjct 1108921 GAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGG 1108862
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| ||||| ||||| ||||| || || || | || || ||||| |||| ||||||
Sbjct 1108861 AATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGAC 1108802
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||||||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 1108801 CTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || ||||| || ||||| | || ||| || || ||||| || || |
Sbjct 1108524 CCACCACGGAGACGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAG 1108465
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || |||||||| ||||| || |||||||| || | ||||||||||||| ||
Sbjct 1108464 AGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGG 1108405
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || |||||||| |||||||| || || || | ||||| ||||| || | |||||
Sbjct 1108404 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACC 1108345
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
||||||||||| ||||| || || | ||||| ||||| || ||||||
Sbjct 1108344 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATT 1108297
Score = 98.7 bits (108), Expect = 2e-15
Identities = 84/104 (81%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
|||||||||||||||||||| || || ||| | ||||| ||||| |||| || || |||
Sbjct 1107890 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCG 1107831
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| || || | |||||| ||||| || |||||
Sbjct 1107830 AGGGTGATAGTCTTGCCGGTGAGAGTCTTTACGAAGATTTGCAT 1107787
Score = 91.5 bits (100), Expect = 3e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| ||||| || ||||||| ||| ||| || ||||| ||||| || |
Sbjct 1108068 CCACCACGCAGACGAAGGACGAGATGTAGAGTGGATTCCTTCTGGATATTGTAATCCGAG 1108009
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985
|| ||||| || ||||| || || || || || ||||| | ||||||||||||
Sbjct 1108008 AGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGTTGGTC 1107956
>seq298
Length=714934
Score = 152 bits (168), Expect = 1e-31
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962
||||| || || || |||||||| |||| ||| ||||| ||||| || ||||| || ||
Sbjct 385827 GTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTGCTTGCCA 385768
Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022
|||||||| | || |||||||| ||||||||||||||||| || ||||| |||||
Sbjct 385767 GCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTCGCTTTG 385708
Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082
|| | || || ||||| || | |||||||| || ||||| ||||| || || | |||
Sbjct 385707 ACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGTAAGGGTC 385648
Query 283083 TTAACGAATATCTGCAT 283099
|| ||||| || |||||
Sbjct 385647 TTCACGAAGATTTGCAT 385631
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || || || || ||||| | || || || || ||||| |||||||
Sbjct 385402 ACCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGA 385343
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || || || || || || || |||||||| | |||||| || || ||
Sbjct 385342 CAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGG 385283
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||| ||||||||||| || || ||| |||| |||||||| |||| ||| ||
Sbjct 385282 GATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCAC 385223
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||||||||| || || | ||||| || || ||||||||
Sbjct 385222 CTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175
Score = 136 bits (150), Expect = 8e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || ||||| | || || || || ||||||||||| |
Sbjct 385630 ACCACCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 385571
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || || || || || ||||| | ||| ||||| || ||
Sbjct 385570 GAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGG 385511
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || |||||||| || ||||| || || ||| | || || ||||| || | |||||
Sbjct 385510 AATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGAC 385451
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | |||||| || || || |||||
Sbjct 385450 CTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
|||||||||||||||||||| ||||| || | ||||| || ||||| | || || |||
Sbjct 385000 CCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTATCCGAGGACTCAACCTCG 384941
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || ||||| || || | ||||| || || ||||||||
Sbjct 384940 AGAGTAATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 384897
>seq370
Length=376741
Score = 98.7 bits (108), Expect = 2e-15
Identities = 126/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
|| || |||||||| | ||| | ||| | |||||||| || || || ||||| || |
Sbjct 251996 CTCATTGGCATGAACTCCGATTTGATGTGCCAATATATTGAGTTTGTTGCTGACCGACTG 252055
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
|||| | || || | |||||||| || ||| |||||| |||| || |||||
Sbjct 252056 CTCGTCTCTCTTGGCAATGAGAAAGTCTACAACAAGTCGAACCCTTTCGACTTCATGGAT 252115
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTAT 230396
| |||||| | ||||| || ||||||||||| |||||||| ||| ||||||
Sbjct 252116 ATGATTTCATTGCAGGGCAAGACTAACTTCTTTGAAAAGCGAGTCTCTGATTAT 252169
>seq367
Length=894951
Score = 84.2 bits (92), Expect = 5e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | || || |||||||||||||||||
Sbjct 540823 ACCACCACGGAGACGGAGCACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGCT 540764
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985
|| |||||||||||||| || || || ||||| |||||||| || || |||||
Sbjct 540763 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTC 540710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046730858142788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |