Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq370 138 1e-27 >seq370 Length=376741 Score = 138 bits (152), Expect = 1e-27 Identities = 293/435 (67%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || |||||||| ||| | ||| || || | ||| || | || || || || || ||| Sbjct 249683 CAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAAT 249742 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 |||||||| |||||||| ||| | |||||||| || |||||||| ||||| ||||| ||| Sbjct 249743 CCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAA 249802 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || || || || || ||||| || ||||| | | | |||| Sbjct 249803 ATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTCCGAAAATGCGGATGTCTCGGTAGAA 249862 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 |||||||| || ||| | ||||| || | | | ||| ||||| || || Sbjct 249863 ATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGG 249922 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||||| ||| ||| ||| | || || || |||||||| | |||| Sbjct 249923 AAGAGAAAGTCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATACGCC 249982 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 || || || | |||||| || ||| ||||| ||||| ||||| | || || | |||| Sbjct 249983 TCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACAACGGGCCTCCG-CAAT 250041 Query 23869 -TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 || || ||| | | || | || | | || ||||| ||||| ||||| || || Sbjct 250042 CTGCACTTCACTCGAGAAGCGTTCCACAAGGTTCTCGTTGACAATGCCATCCGAAGAGGC 250101 Query 23928 AAAGAAAGCAAGAAC 23942 |||||| || ||||| Sbjct 250102 AAAGAACGCGAGAAC 250116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521483945430800