Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq433 131 1e-25 seq298 129 4e-25 seq367 86.0 5e-12 >seq433 Length=1580550 Score = 131 bits (144), Expect = 1e-25 Identities = 172/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | ||| | | || |||||||| || |||||| ||||| ||||| Sbjct 1108303 TTGCATTCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTA 1108244 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | || |||| | || || |||||||| || || ||||||| ||| ||||| || Sbjct 1108243 GTCAGACAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTC 1108184 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | ||| | || ||||| ||| ||||| |||| | ||| | ||||| |||| | Sbjct 1108183 GGGAGGGATGCCCTCCTTGTCCTGGATCTTG-GCTTTGACGTTATCGATGGTATCGGAAG 1108125 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || || | ||||| ||||| |||||||||||||| |||||||| |||||| Sbjct 1108124 ACTCGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 1108069 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| || ||||||||||| | ||| || | || || Sbjct 1108962 ACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTCA 1108903 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || ||||| ||||| | |||||| ||||| | || | ||||||||| || Sbjct 1108902 AGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTGA 1108843 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||||| ||||| ||||| | || || ||||| Sbjct 1108842 ATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTTG 1108783 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 1108782 CCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || ||||||||||| || | ||| |||| | || || |||||||| || || || Sbjct 1108717 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAA 1108658 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| ||| || || || | ||| | || ||||| ||| ||||| ||| | | Sbjct 1108657 GATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 1108598 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||||| || |||||||||| ||| || ||||| ||||| || ||||| || Sbjct 1108597 ATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGAC 1108538 Query 44326 GAAGATTTGCATG 44338 |||||| |||||| Sbjct 1108537 GAAGATCTGCATG 1108525 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||||| || ||||| ||||||| ||| || | || || Sbjct 1108506 ACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCG 1108447 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| |||||||| || | ||| || || || | ||| | |||||||| ||| Sbjct 1108446 AGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGG 1108387 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||||| || || ||||| | || || ||||| Sbjct 1108386 ATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTG 1108327 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||||||||| Sbjct 1108326 CCAGTGAGGGTCTTGACGAAGATTTGCAT 1108298 >seq298 Length=714934 Score = 129 bits (142), Expect = 4e-25 Identities = 157/211 (74%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 ||| ||| || ||||||||||| || ||||||||||| | || |||| | || || | Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 | ||||| || |||||||| | ||||| || || | || | ||| ||||| ||| | Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719 Query 44250 TCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| |||| || ||| | |||||||| | || || || |||| || || |||| Sbjct 385718 TCTTC-GCTTTGACATTGT--CAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCT 385662 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || ||||||||||||||||||||||| Sbjct 385661 TGCCGGTAAGGGTCTTCACGAAGATTTGCAT 385631 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || ||||| || || | || ||| |||| || |||||||| || ||||| Sbjct 385366 CTCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAA 385307 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| |||||||| | ||| | |||||||| || |||||| ||||| | Sbjct 385306 GATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTT 385247 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | ||||||||||| | || |||||||| || ||||||||||| || Sbjct 385246 ATCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGAC 385187 Query 44326 GAAGATTTGCATG 44338 ||||| |||||| Sbjct 385186 AAAGATCTGCATG 385174 Score = 120 bits (132), Expect = 2e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || |||||||| |||| ||| ||| |||| || |||||||| || || || Sbjct 385594 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 385535 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | |||||| ||||| | || | |||||||| ||| |||||| ||| || || Sbjct 385534 GATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCCTT-AACGT 385476 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | |||||||| | || || ||||| | || || ||||| || || || ||||||| Sbjct 385475 TGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCA 385416 Query 44325 CGAAGATTTGCAT 44337 | ||||||||||| Sbjct 385415 CAAAGATTTGCAT 385403 >seq367 Length=894951 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| || |||||||||||||||||| ||| ||| ||| | || || Sbjct 540805 CACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTC 540746 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 |||||||| ||||| |||||||| |||||||| || | ||| Sbjct 540745 AAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGAGG 540704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987671047774