Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq433 152 1e-31
seq298 138 3e-27
seq438 87.8 4e-12
>seq433
Length=1580550
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || ||||| || || || ||||| |||||||| || || |||
Sbjct 1108301 CAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCCGAC 1108360
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| ||||| |||||||| ||||| |||
Sbjct 1108361 ACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAACAA 1108420
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || ||||| || || ||||| ||||| | || || ||||||||||| |
Sbjct 1108421 CGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATAACATT 1108480
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| || || ||||| |||
Sbjct 1108481 CAGAAGGAATCGACCCTTCATCTCGTT 1108507
Score = 149 bits (164), Expect = 2e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || || || ||||| || || || ||
Sbjct 1108073 CAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACTCTCGAAGTCGAGTCTTCCGAT 1108132
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||||||| ||||| |||||||| || || |||||||| |||||||||
Sbjct 1108133 ACCATCGATAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAA 1108192
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| ||||| |||||||| ||||| | || || | || || || ||
Sbjct 1108193 CGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGGCGCACCCTGTCTGACTACAATATC 1108252
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || ||||| || || ||||||
Sbjct 1108253 CAGAAGGAGTCAACCCTTCACCTTGTT 1108279
Score = 149 bits (164), Expect = 2e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || || || ||||| | |||||||| || |||
Sbjct 1108529 CAGATCTTCGTCAAGACGCTTACGGGCAAGACCATCACGTTGGAGGTGGAGTCATCCGAC 1108588
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| |||||||||||||| || || |||||||| ||||| |||
Sbjct 1108589 ACCATTGATAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAACAA 1108648
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| ||||| ||||| || ||||| | || || | || || ||| ||
Sbjct 1108649 CGTCTGATCTTCGCTGGAAAGCAGCTAGAGGATGGGCGCACCCTCTCTGACTACAACATC 1108708
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||||| || ||||| |||||||||
Sbjct 1108709 CAGAAAGAGTCTACACTCCATCTTGTT 1108735
Score = 131 bits (144), Expect = 4e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || ||||| |||||||| ||| || |||
Sbjct 1108757 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAATCTTCCGAC 1108816
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || |||||||| || || ||||| || || || || || ||
Sbjct 1108817 ACAATTGACAATGTGAAGGCTAAGATTCAAGATAAGGAAGGTATTCCCCCTGATCAACAG 1108876
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||||||||| |||||||| |||||||| | || || | ||||| ||| |
Sbjct 1108877 CGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGTCGTACGCTCTCTGATTACAACATT 1108936
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || || ||||||
Sbjct 1108937 CAGAAGGAGTCCACCCTCCACCTTGTT 1108963
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| || || || |||||||||||||| || || |||
Sbjct 1107790 CAAATCTTCGTAAAGACTCTCACCGGCAAGACTATCACCCTCGAGGTTGAGTCTTCCGAC 1107849
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| |||||||| ||||| || ||||| || ||
Sbjct 1107850 ACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGG 1107890
>seq298
Length=714934
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || || ||||||||||| ||||||||| || |||
Sbjct 385178 CAGATCTTTGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAATCTTCTGAC 385237
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || ||||| || || || ||||| |||||||| || ||||||
Sbjct 385238 ACTATTGATAACGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCCTCCCGATCAGCAA 385297
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || ||||||||||| || | || || | || |||||| |
Sbjct 385298 CGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTGTCTGACTATAACATT 385357
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||| ||
Sbjct 385358 CAGAAGGAGTCTACTCTCCATCTCGT 385383
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| ||||| || || || || |||||||||||||| || || |||
Sbjct 385406 CAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCTGAC 385465
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || |||||||||||||| ||||| || || || || || ||
Sbjct 385466 ACCATTGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCCGATCAACAG 385525
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| || || | || || |||| || ||| |
Sbjct 385526 CGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATT 385585
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||| ||
Sbjct 385586 CAGAAGGAGTCTACTCTCCATCTCGT 385611
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || || || |||||||| || || || || |||
Sbjct 385634 CAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCTGAC 385693
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || |||||| |||||||||||||| || || || || || ||||| ||
Sbjct 385694 ACCATTGACAATGTCAAAGCGAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAACAG 385753
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || || ||||||||||| | |||||| | ||||| ||| |
Sbjct 385754 CGCCTTATCTTTGCTGGCAAGCAACTCGAAGATGGGCGCACTCTTTCTGATTACAACATT 385813
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 385814 CAGAAGGA 385821
>seq438
Length=64766
Score = 87.8 bits (96), Expect = 4e-12
Identities = 97/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 177975 AGCTCAGACACCATCG-AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033
||||| | |||||||| ||||| || | | | ||||| || | ||| || ||||| ||
Sbjct 58414 AGCTCCGCCACCATCGCAGAACTGAAATCCAGA-ATTCAAGATAGAGAGGGTATCCCACC 58356
Query 178034 GGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGA 178093
|| ||||||||||| || ||||| |||| |||| | |||||||| ||||| | | ||
Sbjct 58355 CGATCAGCAACGACTCATTTTCGCTGGAAGACAGTTGGAAGATGGTAGGACGATGTCGGA 58296
Query 178094 TTATAAC 178100
|||||||
Sbjct 58295 TTATAAC 58289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203721607014668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |