Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq298 152 5e-32 seq433 149 6e-31 seq367 87.8 2e-12 seq353 87.8 2e-12 >seq298 Length=714934 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || ||||||||||||||| ||||||||| Sbjct 385629 CCACCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAG 385570 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| ||||| || || |||||||| || | |||| Sbjct 385569 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGA 385510 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| | || || | |||| | | | ||||| |||||| || Sbjct 385509 ATGCCTTCCTTGTCC-TGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGAC 385451 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| || || || ||||| Sbjct 385450 CTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 || || |||||||||||||||||||| || || || || |||||| | || ||||| ||| Sbjct 385833 TGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTGC 385774 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTT 41779 ||||| || || || |||||||||||||| | ||||| | |||||||||| ||| | || Sbjct 385773 TTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC-TGAATCTT 385715 Query 41780 TGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGT 41838 |||| || | | | ||||| ||||| || |||| || || || || || || Sbjct 385714 CGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGT 385655 Query 41839 CAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| || ||||| Sbjct 385654 AAGGGTCTTCACGAAGATTTGCAT 385631 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| || || ||||||||||||||||||||| || Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| || || || || || || || || | || Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||| || ||| || |||| ||| | | |||||| || ||||| Sbjct 385281 ATGCCTTCCTTATCTTGGATCTTCGCCTTC-ACGTTATCAATAGTGTCAGAAGATTCCAC 385223 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || || || || ||||| || || ||||||||| Sbjct 385222 CTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCATG 385174 Score = 86.0 bits (94), Expect = 6e-12 Identities = 93/122 (76%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || || ||||||||||||||| || || || Sbjct 385174 GCCTCCACGGAGACGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGA 385115 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGG 41753 || || || |||| ||||| ||||| || ||||| |||| ||||||||||| |||| Sbjct 385114 AAGAGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCAGGCGG 385055 Query 41754 GA 41755 || Sbjct 385054 GA 385053 >seq433 Length=1580550 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | || ||||| || || ||| ||||| ||||| ||||| ||| Sbjct 1108752 CCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAG 1108693 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||||||| | || || |||||||| || ||||| ||||| || |||||||| | || Sbjct 1108692 AGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGG 1108633 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | || | | |||||| |||||||| Sbjct 1108632 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCAC 1108574 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||| || || || ||||| |||||||| ||||| ||||||||| Sbjct 1108573 CTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCATG 1108525 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || || ||||||||||||||||| ||||| Sbjct 1108525 GCCACCACGGAGACGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGA 1108466 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || | || ||||| ||||||||||| || || || || |||||||| | || Sbjct 1108465 GAGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGG 1108406 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| || |||| || | | | |||||| ||||| | Sbjct 1108405 GATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCGATGGTGTCGGATGACTCGA 1108347 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| ||||| || ||||| Sbjct 1108346 CCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 1108298 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| || || ||||| || Sbjct 1108296 CCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGAC 1108237 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||||||| | || ||||||||||| || ||||| ||||| || || ||||| | || Sbjct 1108236 AGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGG 1108177 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || |||| ||| | | || ||| ||||| || Sbjct 1108176 ATGCCCTCCTTGTCC-TGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGAC 1108118 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 1108117 TTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 1108069 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||||||||| || || ||| Sbjct 1108980 CCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 1108921 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||| ||||||||||| || || |||||||| || | |||| Sbjct 1108920 AGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGA 1108861 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| | | ||| | || || | || | | | |||||| || || || Sbjct 1108860 ATACCTTCCTTAT-CTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGAC 1108802 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| |||||||| Sbjct 1108801 CTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || ||| |||||||| || || || || || Sbjct 1108069 GCCACCACGCAGACGAAGGACGAGATGTAGAGTGGATTCCTTCTGGATATTGTAATCCGA 1108010 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| |||||| |||| || ||||||||||| ||||| || || || |||||||| | || Sbjct 1108009 GAGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGTTGGTCTGGAGG 1107950 Query 41755 AA 41756 || Sbjct 1107949 AA 1107948 >seq367 Length=894951 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || ||||| | ||||| || || || |||||| || ||||| |||||| Sbjct 540825 CCACCACCACGGAGACGGAGCACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCG 540766 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||||||||| | || || ||||||||||||||||| |||| ||||| ||||| Sbjct 540765 CTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTC 540710 >seq353 Length=244416 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| |||||| ||||||||| | || |||||||||||||| ||||| Sbjct 157165 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAA 157106 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAA 41756 |||| || |||||||| | ||||| Sbjct 157105 GATCAATCGTTGTTGGTCAGGGGGAA 157080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462300405586400