Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq177628 111 3e-19 seq180125 100 6e-16 >seq177628 Length=4820 Score = 111 bits (122), Expect = 3e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCG-CCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 ||||| |||| |||| ||| ||||||||||| || |||| ||| | |||||||| || Sbjct 2829 GACGCACTTCCC-GTCGACCTCATTGGCATGAATGCCAAACTGATGTGCCAGTACATTGA 2771 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 ||| || || || ||| || | || |||||||| |||| || |||||| || | || Sbjct 2770 ATTTGTGGCGGATCGCCTTCTCGTCGCACTTGGGAACGAAAAGGTGTACCACGCATCCAA 2711 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 || || | || ||||| | || ||||| |||||||| |||||||| || || ||||| Sbjct 2710 TCCTTTCGACTTCATGGACATGATCTCGCTGCAAGGGAAAACCAACTTTTTTGAGAAGCG 2651 Query 230607 TGT 230609 || Sbjct 2650 GGT 2648 >seq180125 Length=1791 Score = 100 bits (110), Expect = 6e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||||| || ||| | ||||||||||| || || || |||||| | Sbjct 1592 CTCATCGGCATGAACGCCACGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGCCTC 1533 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || || || |||| ||||| ||||| || ||||| || | || ||||| Sbjct 1532 CTAGTCGCTCTCGGCAACGATAAAGTCTACAATTCGGCAAACCCTTTCGATTTCATGGAT 1473 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA 230618 | ||||| || ||||| ||||| ||||| ||||| ||||| ||| ||||| Sbjct 1472 ATGATTTCCCTGCAAGGCAAGACGAACTTTTTCGAGAAGCGCGTCTCGGACTA 1420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055356852952160