Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq177628 129 6e-25
>seq177628
Length=4820
Score = 129 bits (142), Expect = 6e-25
Identities = 279/413 (68%), Gaps = 6/413 (1%)
Strand=Plus/Plus
Query 16223 CCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTC 16282
|| ||||| | |||||| || || || || || || || || ||||| || || ||
Sbjct 2999 CCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTT 3058
Query 16283 TTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAA 16342
|| | |||||| || | ||||||||||| |||||||||||||| ||||| | || |||
Sbjct 3059 TTGATCCAGAAAATGGAGGCAAATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAA 3118
Query 16343 GCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTC 16401
|| | || || || || | || | | | || | ||| ||||| || | |||| ||
Sbjct 3119 GCCACCAAGCGCTCGGCAAAGGT-GGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTC 3177
Query 16402 GGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTC--C 16459
||||| | || ||||| ||||| || | ||| | |||| | ||| ||| |
Sbjct 3178 AGCTTTGCGCTTGATACATGGGATCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGC 3237
Query 16460 TGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCT 16519
| || ||| |||||||| || || || | |||| | || ||||| ||||| ||
Sbjct 3238 AGGATCACGA--ATATACGTGTCGATGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCC 3295
Query 16520 ATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAAT 16579
|| || ||||| ||||||||||| || || || || || ||||| | ||
Sbjct 3296 ATCATGATTTGAAAACCATAGAAGCAGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAA 3355
Query 16580 CGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAA 16632
|| ||| |||||||| || ||||| ||||| || || || || |||||
Sbjct 3356 CGCTCCAGGAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAA 3408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510250727674240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |