Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq177628 129 6e-25 >seq177628 Length=4820 Score = 129 bits (142), Expect = 6e-25 Identities = 279/413 (68%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 16223 CCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTC 16282 || ||||| | |||||| || || || || || || || || ||||| || || || Sbjct 2999 CCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTT 3058 Query 16283 TTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAA 16342 || | |||||| || | ||||||||||| |||||||||||||| ||||| | || ||| Sbjct 3059 TTGATCCAGAAAATGGAGGCAAATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAA 3118 Query 16343 GCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTC 16401 || | || || || || | || | | | || | ||| ||||| || | |||| || Sbjct 3119 GCCACCAAGCGCTCGGCAAAGGT-GGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTC 3177 Query 16402 GGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTC--C 16459 ||||| | || ||||| ||||| || | ||| | |||| | ||| ||| | Sbjct 3178 AGCTTTGCGCTTGATACATGGGATCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGC 3237 Query 16460 TGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCT 16519 | || ||| |||||||| || || || | |||| | || ||||| ||||| || Sbjct 3238 AGGATCACGA--ATATACGTGTCGATGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCC 3295 Query 16520 ATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAAT 16579 || || ||||| ||||||||||| || || || || || ||||| | || Sbjct 3296 ATCATGATTTGAAAACCATAGAAGCAGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAA 3355 Query 16580 CGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAA 16632 || ||| |||||||| || ||||| ||||| || || || || ||||| Sbjct 3356 CGCTCCAGGAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAA 3408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510250727674240