Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq571 311 9e-80 seq177628 269 3e-67 seq179421 116 4e-21 seq161514 111 2e-19 seq179755 98.7 1e-15 seq32941 98.7 1e-15 seq171348 84.2 2e-11 >seq571 Length=811 Score = 311 bits (344), Expect = 9e-80 Identities = 365/493 (74%), Gaps = 3/493 (1%) Strand=Plus/Minus Query 116646 TGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACA 116705 ||||||| |||| | ||||| |||||||| | |||||| | ||||||||| |||||| Sbjct 495 TGTACAAGCAGGCACAAGCGTCTTTCTGGACTGCCGAGGAAATCGACCTGTCCCAGGACA 436 Query 116706 CGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGG 116762 | |||||||| | | ||| ||| | ||||||| ||||||| ||||| || | Sbjct 435 CTCGCGACTGGAGGGACAAGCTGAGCGATGATGAGCGCCTTTTCATCTCACACGTCCTCG 376 Query 116763 CCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGG 116822 | |||||||||||| || |||||||||||||| || || || | || ||||| | | Sbjct 375 CTTTTTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTTGTAGCACGGTTCGCCAATG 316 Query 116823 AGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGC 116882 | |||||| || ||||| || ||||||||||| || ||||| ||||||||||| | Sbjct 315 AAGTGCAGTGCGCTGAGGCTCGCTGCTTCTACGGATTCCAGATTATGATGGAGAACGTTC 256 Query 116883 ACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCC 116942 |||| |||| || || || |||||||| ||||| | | | | |||||| | || Sbjct 255 ACTCCGAAACTTACTCCCTGCTAATCGACACTTACGTCAGGGATCCTGTGGAGAAACACC 196 Query 116943 GTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGC 117002 | ||| ||||||| ||||||| || |||||||| | ||||||||||||||| || Sbjct 195 GCTTGCTGAACGCGGTCGAGACCATCGAGTGCGTCAGGAACAAGGCCGAGTGGGCGGTGA 136 Query 117003 GCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCG 117062 |||||| ||| | | | ||| | || | |||||||| ||||| |||||||| || | Sbjct 135 AGTGGATCACCGACGGGCACGCCACTTTTGCGGAGCGCCTCGTGGCTTTCGCGGCGGTGG 76 Query 117063 AGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCA 117122 |||| ||||||| || ||| |||||| ||| | || |||||||||||||| || || | Sbjct 75 AGGGTATCTTCTTCTCAGGCTCTTTCGCTGCCGTGTTCTGGCTCAAGAAACGGGGTCTGA 16 Query 117123 TGCCCGGCCTGAC 117135 |||| || |||| Sbjct 15 TGCCAGGATTGAC 3 >seq177628 Length=4820 Score = 269 bits (298), Expect = 3e-67 Identities = 412/583 (71%), Gaps = 17/583 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||||||||| |||| | |||||||| | |||||| | ||||| Sbjct 3534 ATATGGCAAATGTACAAAAAGGCCCAGGCCTGCTTCTGGACTGCAGAGGAGATAGACCTC 3475 Query 116696 TCCAAGGACACGAGCGACTGGG--AGCG-CTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||| | ||| ||||||| ||| | | |||| |||||| |||||||| || Sbjct 3474 TCCCACGACGTTCTCGACTGGACAAGCAACCTCAACGCCAACGAACGCCATTTTATTTCC 3415 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || ||||||| ||||||||| |||||||||||||||||||| || | |||||| Sbjct 3414 CATGTCTTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCCTGGAGCGT 3355 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | || || |||| || || || || |||||||| || ||||| ||| ||| Sbjct 3354 TTCTCAAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATGATG 3295 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA----CGTGCGCTCTTC 116928 || ||| | ||||| || | ||| ||| ||||||||||||||| |||| | || | Sbjct 3294 GAAAACATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATC-CTGC 3236 Query 116929 GGA---GGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAA 116985 || |||| | | |||| | ||| | |||||||| || || |||| || Sbjct 3235 TGAACGGGAGTA------TCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAA 3182 Query 116986 GGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGT 117045 || || ||||| || |||||| | | || | || |||| | ||||||| |||| Sbjct 3181 AGCTGACTGGGCTCTCAAGTGGATCTCGGACAAACGTTCCACCTTTGCCGAGCGCTTGGT 3122 Query 117046 GGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCT 117105 ||| ||||||||||| || || | |||||||| || || ||| |||| || ||| | Sbjct 3121 GGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTCTGGAT 3062 Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 ||| || || || || ||||| || |||| ||| || ||||||||| | | ||||| Sbjct 3061 CAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGA 3002 Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG 117208 ||| |||| ||| ||||| || ||||| |||| ||| || Sbjct 3001 GGGCATGCACACCGATTTTGCATGCTTGCTCTTCACACATCTG 2959 Score = 208 bits (230), Expect = 8e-49 Identities = 217/285 (76%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || |||||||| || || |||||||||| ||||||| |||||||| Sbjct 4503 ATTTGGCAAATGTATAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATGGACCTG 4562 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 || ||||||| | ||||||| | | | |||| | ||||||| || |||||| Sbjct 4563 TCGAAGGACATGCACGACTGGAACAACAAGCTCAACGCCGACGAGCGSCACTTCATCTCY 4622 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||||||||| || ||||||||| ||||||||||| ||| |||||||| Sbjct 4623 CATGTCCTCGCCTTTTTCGCTGCGTCCGACGGCATTGTCAACGAGAACCTGCTCGAGCGT 4682 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || |||||||| |||||||| || |||||||||||||| ||||| ||| Sbjct 4683 TTCTCGAACGAAGTGCAGGTCGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATTATGATG 4742 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||| | ||||| || | || || | |||||||| ||| Sbjct 4743 GAGAATATTCACTCCGAGACATACTCTCTGTTGATCGACACATAC 4787 >seq179421 Length=8220 Score = 116 bits (128), Expect = 4e-21 Identities = 93/112 (83%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| |||||||||| || ||||||| ||| ||||| ||||| || |||| |||| Sbjct 1614 GCATCCCCCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCA 1555 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 | || | |||||||||||||||||||||| | |||||||| || || |||| Sbjct 1554 CGCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGTTCTGCG 1503 >seq161514 Length=192 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 116993 TGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTC 117052 ||||| || || |||||| || | || || |||| |||||||| || || || ||| Sbjct 191 TGGGCCCTCCGATGGATCAACGACCAGCAGTCCACCTTTGGCGAGCGTCTCGTCGCGTTC 132 Query 117053 GCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAA 117112 || || ||||||||| ||||||| || || || || |||| || ||| | ||||| Sbjct 131 GCCGCGGTCGAGGGCATCTTCTTCTCCGGTTCATTTGCGTCCATTTTCTGGATGAAGAAG 72 Query 117113 CGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTG 117172 ||||| |||||||| || |||| ||| |||||||||||| | | ||||| || || Sbjct 71 CGCGGACTCATGCCGGGATTGACGTTCTCGAACGAGCTCATCAGCCGCGACGAAGGAATG 12 Query 117173 CATTGCGACTT 117183 || |||||| Sbjct 11 CACACCGACTT 1 >seq179755 Length=18176 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | |||||||| || | |||| ||| ||||| ||||| || |||| ||||| Sbjct 9603 GCATCCCCCCCGACCAGCAGCGGTTGATCTTCGCTGGCAAGCAGCTTGAAGACGGGCGCA 9544 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 | |||| ||||||||||||||||||||| | || || || || ||| Sbjct 9543 CGCTCAGCGACTACAACATCCAGAAGGAATCGACTCTCCACCTGGTG 9497 >seq32941 Length=300 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 || |||||||| || || ||| |||||||||||||||||||||| | || | | | || Sbjct 105 GTCCTGGCCTTCTTTGCAGCCTCCGACGGCATCGTCAACGAGAATTTAGTGGCGAGGTTT 164 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCG-CCATGGA 116874 || | || || ||| || || || || ||||||| |||||||| | || ||||| Sbjct 165 GCGAATGAAGTACAGTGTGCGGAAGCTCGCTGCTTCTTTGGCTTTCA-AGCGATGATGGA 223 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 ||| | |||||||| | || || ||||||||| |||||| | ||| | || | Sbjct 224 AAACATCCACTCGGAGACCTACTCTCTCCTCATCGATACGTACATCCGCGATCCGTCTCA 283 Query 116935 GAAGCTCCGTTTG 116947 ||| ||||| ||| Sbjct 284 GAAACTCCGCTTG 296 >seq171348 Length=246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 ||||||| | ||||| || || || |||| ||| || || |||||||| || | |||| Sbjct 158 GCATCCCGCCCGACCAACAGCGTCTTATCTTCGCCGGAAAGCAGCTGGAGGATGGTCGCA 217 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAG 40881 ||||| |||||||||||||||||||||| Sbjct 218 CCCTCTCCGACTACAACATCCAGAAGGAG 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514046870232320