Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2044 89.7 3e-13 seq179755 86.0 4e-12 seq179421 82.4 5e-11 >seq2044 Length=134 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34256 AAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA 34315 || ||||| ||||||||||| ||| | | ||||||||| ||||| ||| | Sbjct 134 AAGATGAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACG 75 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | |||| || | || ||||| |||| ||||||||| ||||||||||| || ||| Sbjct 74 TTGTCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTC 15 Query 34376 ACAAAGATCTGCAT 34389 || ||||||||||| Sbjct 14 ACGAAGATCTGCAT 1 >seq179755 Length=18176 Score = 86.0 bits (94), Expect = 4e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||||||| | ||| ||| ||||| |||||||||||| Sbjct 9480 CCACCACGCAGACGGAGCACCAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGCTG 9539 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || |||| || | ||||||||| ||||| || | ||||||||||||| ||| Sbjct 9540 AGCGTGCGCCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAACCGCTGCTGGTCGGGGGGG 9599 Query 34283 ACGCT 34287 | ||| Sbjct 9600 ATGCT 9604 >seq179421 Length=8220 Score = 82.4 bits (90), Expect = 5e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| || ||||| | || || ||||| |||||||||||| | Sbjct 1491 CCTCCACGCAGACGCAGAACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1550 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 ||| ||| |||| || | ||||||||| ||||| ||||| ||||||||||| Sbjct 1551 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC 1603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322355259921920