Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq2044 89.7 3e-13
seq179755 86.0 4e-12
seq179421 82.4 5e-11
>seq2044
Length=134
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34256 AAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA 34315
|| ||||| ||||||||||| ||| | | ||||||||| ||||| ||| |
Sbjct 134 AAGATGAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACG 75
Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375
| | | |||| || | || ||||| |||| ||||||||| ||||||||||| || |||
Sbjct 74 TTGTCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTC 15
Query 34376 ACAAAGATCTGCAT 34389
|| |||||||||||
Sbjct 14 ACGAAGATCTGCAT 1
>seq179755
Length=18176
Score = 86.0 bits (94), Expect = 4e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||||||| | ||| ||| ||||| ||||||||||||
Sbjct 9480 CCACCACGCAGACGGAGCACCAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGCTG 9539
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| || |||| || | ||||||||| ||||| || | ||||||||||||| |||
Sbjct 9540 AGCGTGCGCCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAACCGCTGCTGGTCGGGGGGG 9599
Query 34283 ACGCT 34287
| |||
Sbjct 9600 ATGCT 9604
>seq179421
Length=8220
Score = 82.4 bits (90), Expect = 5e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || ||||| | || || ||||| |||||||||||| |
Sbjct 1491 CCTCCACGCAGACGCAGAACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1550
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
||| ||| |||| || | ||||||||| ||||| ||||| |||||||||||
Sbjct 1551 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC 1603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322355259921920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |