Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq177628 109 5e-19 seq161514 87.8 2e-12 >seq177628 Length=4820 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 || |||||||| |||| || ||||| | || || | ||| || || ||||| | Sbjct 2978 CATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGTCAAT 3037 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| || || || ||||| ||||| || || | ||||||||| || ||||||||| Sbjct 3038 CCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAATGACCCTGAAAAGAAT 3097 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTC 16389 ||||||||||| || || || || ||||| ||||| Sbjct 3098 ATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTC 3132 >seq161514 Length=192 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 16250 TGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCT 16309 |||| ||||||||| | || || | |||||| || || || | || ||||| ||||| Sbjct 10 TGCATTCCTTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAATCCCGGCATGAGTCCG 69 Query 16310 CGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCG 16369 || || || ||||| || || | ||||||||||| || ||||| || || || || ||| Sbjct 70 CGCTTCTTCATCCAGAAAATGGACGCAAATGAACCGGAGAAGAAGATGCCCTCGACCGCG 129 Query 16370 GCAAATGCAACCAATCGCTCACC 16392 || || || || | ||||| || Sbjct 130 GCGAACGCGACGAGACGCTCGCC 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461459600195200