Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq571 136 4e-27 seq181166 132 4e-26 seq173114 111 1e-19 seq177628 107 2e-18 seq177589 98.7 9e-16 seq161514 91.5 1e-13 seq69961 82.4 7e-11 >seq571 Length=811 Score = 136 bits (150), Expect = 4e-27 Identities = 333/496 (67%), Gaps = 9/496 (2%) Strand=Plus/Minus Query 57580 TGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATC 57639 ||||||| ||||| |||| || || ||||| | ||| ||| | |||||||| |||| Sbjct 495 TGTACAAGCAGGCACAAGCGTCTTTCTGGACTGCCGAGGAAATCGACCTGTCCCAGGACA 436 Query 57640 TGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGG 57696 |||| ||| || || | || |||| | ||| || |||||| | | Sbjct 435 CTCGCGACTGGAGGGACAAGCTGAGCGATGATGAGCGCCTTTTCATCTCACACGTCCTCG 376 Query 57697 CGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAG 57756 | ||||||||||| || ||||| || || ||||| || | || | | | || | | | Sbjct 375 CTTTTTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTTGTAGCACGGTTCGCCAATG 316 Query 57757 AAGTGCAAGTG-ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 |||||| |||| | ||||| | ||||| |||||||| || | || || ||||| Sbjct 315 AAGTGC-AGTGCGCTGAGGCTCGCTGCTTCTACGGATTCCAGATTATGATGGAGAACGTT 257 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT 57875 || || |||| || || || || ||||| || ||||| | ||| | ||||||| Sbjct 256 CACTCCGAAACTTACTCCCTGCTAATCGACACTTACGTCAGGGATCCTGTGGAGAAACAC 197 Query 57876 AGACTGTTCAACGCGATCGAAACAAT-GCCCGCGATCGCCAAGAAGGCAGAGTGGTCAAT 57934 | || | |||||| |||| || || | ||| || || ||||| |||||| | | Sbjct 196 CGCTTGCTGAACGCGGTCGAGACCATCGAGTGCG-TCAGGAACAAGGCCGAGTGGGCGGT 138 Query 57935 CAAATGGAT-AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCG 57993 || ||||| | | | ||| ||||| || || ||| | || | || ||||| || | Sbjct 137 GAAGTGGATCACCGACGGGCAC-GCCACTTTTGCGGAGCGCCTCGTGGCTTTCGCGGCGG 79 Query 57994 TCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCC 58053 | || ||||| ||||| || ||| || || || | || ||| | |||||||| || | Sbjct 78 TGGAGGGTATCTTCTTCTCAGGCTCTTTCGCTGCCGTGTTCTGGCTCAAGAAACGGGGTC 19 Query 58054 TGATGCCCGGCCTGAC 58069 ||||||| || |||| Sbjct 18 TGATGCCAGGATTGAC 3 >seq181166 Length=959 Score = 132 bits (146), Expect = 4e-26 Identities = 187/260 (72%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 22456 CACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTC 22515 ||| || || ||||||||||| | ||||| || ||| |||||| ||| |||| || Sbjct 519 CACGACCTGGAACTCGCCGGAGAGCACGCGCCGCGTGTAGATGTTGCTCGTGTACGGCTC 460 Query 22516 GAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAG 22575 ||| | || ||||| || || ||||| ||||| ||||||||||||||||| || Sbjct 459 GAAGCACTCGTTGTTCCCGAGGATCTGGCTCGTCGACGCGGTCGGCATCGGCGCGGTGAG 400 Query 22576 TAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAG 22635 || ||||| | | ||| ||| | || || ||||||| | |||||||||||| Sbjct 399 CAGGGAGTTGCGGAGGCCCGTCTTCGCGATCTTGGCCTTGAGCGTGTCCCAGTCCCACAG 340 Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGG 22693 | |||||| || | ||||||| ||||| |||| | |||| |||| ||| ||| Sbjct 339 CGAGCTCGGCGTGAC---GCCCCACATGTCGTACTGCAGCTCGCCCTGCGA--CGCGGGG 285 Query 22694 CTGCCTTCGTACGTTTCGTA 22713 ||||| |||||||| ||||| Sbjct 284 CTGCCCTCGTACGTCTCGTA 265 >seq173114 Length=471 Score = 111 bits (122), Expect = 1e-19 Identities = 202/288 (70%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 22496 ATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCG 22555 |||||| || |||| ||||| |||| ||||| |||| || || ||||| || Sbjct 2 ATGTTGCTGGTATACGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGGCTCGTCGACGCA 61 Query 22556 GTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGA-AATTTTACTCTT 22614 || ||||||||||| || || |||||| | || ||| | |||| ||| || ||| Sbjct 62 GTGGGCATCGGCGCTGTCACTAACGAGTTGCGCA-GCCCCGTCTTGACAATCTTGGCCTT 120 Query 22615 GAGC--ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGC 22672 |||| ||| |||||||||||| | ||| || ||| ||||||||||||| || Sbjct 121 GAGCGCATC--CCAGTCCCACAGTGAGCTCGGTGTGACAC---CCCACATATCGTACTGG 175 Query 22673 AACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCA 22732 | | ||||| |||||||||||||||| |||| ||||| || || | || | || Sbjct 176 AGCTGCCCGCGCGACGCCGGGCTGCCTTCGAACGTCTCGTAGGGCCCCTCCTTCTCCGCC 235 Query 22733 AGTTC-GCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGAT 22779 | || ||| || ||||| | ||| | | || |||||||| ||||| Sbjct 236 ATCTCTGCA-CTGGCCTCGAGCGCAGCATGGTAGATAGTCTCAAAGAT 282 >seq177628 Length=4820 Score = 107 bits (118), Expect = 2e-18 Identities = 369/569 (65%), Gaps = 25/569 (4%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| | || | || ||||| | || || ||||||| Sbjct 3534 ATATGGCAAATGTACAAAAAGGCCCAGGCCTGCTTCTGGACTGCAGAGGAGATAGACCTC 3475 Query 57630 TCTAAGGATCTGAGCGATTGGG-ATTC--CCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || | || | ||| ||| | | |||||| | || | |||||||| Sbjct 3474 TCCCACGACGTTCTCGACTGGACAAGCAACCTCAACGCCAACGAACGCCATTTTATTTCC 3415 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || ||||| || |||||||| || || || || || |||||||| | | || | Sbjct 3414 CATGTCTTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCCTGGAGCGT 3355 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || ||| ||||| || | | || || | ||||| || || |||||| | || Sbjct 3354 TTCTCAAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATGATG 3295 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTA----CGTGAAGGACAA 57862 |||||| | || || || | ||| ||||| |||||||| ||||| ||||| Sbjct 3294 GAAAACATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATCCTGCT 3235 Query 57863 CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AA 57919 ||| || ||| |||||| | || | || || || || ||| ||| || Sbjct 3234 GAACGGGA---GTAT-CTGTTCGATGCCGTGGAGACGATCCCATGTATC---AAGCGCAA 3182 Query 57920 GGCAGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGC 57975 || || ||| | |||| ||||| | || || |||| || |||||| | Sbjct 3181 AGCTGACTGGGCTCTCAAGTGGATCTCGGACAAACGTT----CCACCTTTGCCGAGCGCT 3126 Query 57976 TAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTT 58035 | | || ||||| ||||| ||||||||||||||||| || ||||| | || || | Sbjct 3125 TGGTGGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTCT 3066 Query 58036 GGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCG 58095 |||| || || || || || ||||| || |||| || || ||| | || |||| Sbjct 3065 GGATCAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCG 3006 Query 58096 ACGAGGGTCTCCATACTGATTTTGCGTGC 58124 ||||||| | || || |||||||| ||| Sbjct 3005 ACGAGGGCATGCACACCGATTTTGCATGC 2977 >seq177589 Length=846 Score = 98.7 bits (108), Expect = 9e-16 Identities = 194/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 23594 CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATC 23653 ||| | || || | |||||| | || | || ||||||||| | || ||||| Sbjct 744 CCTGTAGCCCGGATGTTGTGGATGTTCAGGCCAATGCCTCCGGCACTCTTACTGATCATG 685 Query 23654 GCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAG 23713 ||||| | ||||| ||||||||||| ||||| || ||| ||||| |||||| Sbjct 684 GCGCAGTTCTTCAGGGTGTCGTAGATCCCCTCAATAGAGTCGTCTTTTAAGCAGACCAAA 625 Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773 || ||||| | || | | ||||| | || ||| || || ||| ||||||| Sbjct 624 AAGCACGAGCTGAGCTGAGGATGTGGCGTGCCCGCATTGAAGAGGGTGGGGGTGGCGTGG 565 Query 23774 GTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCG 23833 || ||||| | | |||||| |||||||| || || ||| || || | ||| ||| Sbjct 564 GTGAAGTAGCGCTCCGACATGAGATTGTAGGTCTCAATGACGCGTTCGAGGTCGGATCCA 505 Query 23834 TGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 || || || | |||||||||||| || | || ||||| | ||| || Sbjct 504 TGAATGCCAACGGCGACGCGCATGATTAGGTGCTGAGGCCGCTCAAC 458 >seq161514 Length=192 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 |||| || | |||| | || ||||||||||||| ||||| || || ||||| || || Sbjct 160 CCACCTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGTT 101 Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077 |||||| | || || ||||||||||| ||||| || ||||| || ||||||| | Sbjct 100 CATTTGCGTCCATTTTCTGGATGAAGAAGCGCGGACTCATGCCGGGATTGACGTTCTCGA 41 Query 58078 ACGAGTTGATATCGCGCGACGAGGG 58102 ||||| | || |||||||| || Sbjct 40 ACGAGCTCATCAGCCGCGACGAAGG 16 >seq69961 Length=148 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 23738 GGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGA 23797 ||||| |||| ||| || |||||| ||||||| || ||||| | | ||||| || Sbjct 4 GGCGTGCCGGCGTTGAAGAGAGTCGGGGTGGCGTGGGTGAAGTACCGCTCGGACATGAGG 63 Query 23798 TTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATC 23857 |||||||| |||| | || || ||||| ||||| || |||| ||||||||||| Sbjct 64 TTGTACGTCTCGAGGACGCGCTCGATGTCGGAACCGTGAATGCCGACAGCGACGCGCATG 123 Query 23858 ATCATGTATTGAGGTCTCTCGAC 23880 || | || ||| || | |||||| Sbjct 124 ATGAGGTGTTGGGGGCGCTCGAC 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444752103133440