Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq177589 109 1e-18 seq177628 84.2 4e-11 >seq177589 Length=846 Score = 109 bits (120), Expect = 1e-18 Identities = 177/252 (70%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 ||||| ||| |||| ||| || || | ||| || || || || || |||||||| Sbjct 708 CCTCCGGCACTCTTACTGATCATGGCGCAGTTCTTCAGGGTGTCGTAGATCCCCTCAATA 649 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910 || |||| | || | | ||||||||| || || || |||| | || || Sbjct 648 GAGTCGTCTTTTAAGCAGACCAAAAAGCACGAGCTGAGCTGAGGATGTGGC-GTGCCCGC 590 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || || ||||||| || ||||| || ||| || ||||||||||| || || || Sbjct 589 ATTGAAGAGGGTGGGGGTGGCGTGGGTGAAGTAGCGCTCCGACATGAGATTGTAGGTCTC 530 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 |||||| || || ||| ||||| |||||||| || || || ||||| || | || ||| Sbjct 529 AATGACGCGTTCGAGGTCGGATCCATGAATGCCAACGGCGACGCGCATGATTAGGTGCTG 470 Query 95031 AGGGCGCTCAAC 95042 ||| |||||||| Sbjct 469 AGGCCGCTCAAC 458 >seq177628 Length=4820 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/158 (72%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 101916 TTGTTGCCTTT-GCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTC 101974 ||| || |||| || || |||||||| || |||||| || |||| || ||||||||| Sbjct 3126 TTGGTGGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTC 3067 Query 101975 TGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGG 102034 |||||||| || |||| || |||| || | || | ||| |||||| |||| | Sbjct 3066 TGGATCAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGC 3007 Query 102035 GACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||||| || | || ||| ||||||||| |||| || Sbjct 3006 GACGAGGGCATGCACACCGATTTTGCATGCTTGCTCTT 2969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987276008080560