Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq177628 127 3e-24
seq571 87.8 2e-12
>seq177628
Length=4820
Score = 127 bits (140), Expect = 3e-24
Identities = 309/465 (66%), Gaps = 5/465 (1%)
Strand=Plus/Plus
Query 33566 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTC 33625
|||| | || | ||| ||||| |||||| ||||| |||||||| | || || | ||
Sbjct 2962 ATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTC 3021
Query 33626 GTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAA 33685
|| || || || | ||| ||||| || || |||||||| | ||| || ||||| || ||
Sbjct 3022 ATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAA 3081
Query 33686 TGATCCGGAAAAGAAGATTCCTTCTACTGCAGC-AAAGGCAATAAGTCTCTCTCCATAAC 33744
||| || |||||||| || ||||| || || || |||| || ||| | ||| || |
Sbjct 3082 TGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAG-CGCTCGGCAAAGG 3140
Query 33745 CGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 33801
|| | |||| |||||||| ||||||| || || || || | ||| || |
Sbjct 3141 TGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGA 3200
Query 33802 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGA 33861
|||| || | ||||| || ||||| | |||| | ||| || ||| || ||||
Sbjct 3201 TCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGA 3260
Query 33862 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33921
| | || ||| | || || ||||||||||| || || ||||| || ||||| |
Sbjct 3261 TGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAAGC 3320
Query 33922 ATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33981
| | || || | ||| ||||| | | || || || | || || || || |
Sbjct 3321 AGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGACGA 3380
Query 33982 TTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 34026
| || || ||| || || || ||||| ||||| |||||||
Sbjct 3381 TGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAAT 3425
>seq571
Length=811
Score = 87.8 bits (96), Expect = 2e-12
Identities = 241/369 (65%), Gaps = 3/369 (1%)
Strand=Plus/Plus
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
||| ||||| || || || || || ||||| || | || |||||| || || || |||||
Sbjct 8 TCCTGGCATCAGACCCCGTTTCTTGAGCCAGAACACGGCAGCGAAAGAGCCTGAGAAGAA 67
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATG 33757
||| || || || || || || || | || | ||| || || |||| | |||
Sbjct 68 GATACCCTCCACCGCCGCGAAAGCCACGAGGCGCTCCGCAAAAGTGGCGTGCCCGTCGGT 127
Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817
|||||||| ||||| |||||||| || | || || || || || | || ||
Sbjct 128 GATCCACTTCACCGCCCACTCGGCCTTGTTCCTGACGCACTCGATGGTCTCGACCGCGTT 187
Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877
| | || ||| || | ||| | || ||||| ||||| | || || |
Sbjct 188 CAGCAAGCGGTGTTTCTCCACAGGATCCCTGACGTAAGTGTCGATTAGCAGGGAGTAAGT 247
Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937
||| || |||| ||| || || ||||| ||||||||||| || | |||||| |
Sbjct 248 TTCGGAGTGAACGTTCTCCATCATAATCTGGAATCCGTAGAAGCAGCGAGCCTCAGCGCA 307
Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997
||||||||| | || ||| || | | ||||| || || || ||||| ||| ||
Sbjct 308 CTGCACTTCATTGGCGAACCGTGCTACAAGGTTTTCGTTGACGATGCCATCCGAGGCGGC 367
Query 33998 AAAAAACGC 34006
||||| ||
Sbjct 368 GAAAAAAGC 376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628384513032960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |