Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq177628 86.0 6e-12 >seq177628 Length=4820 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 11614 ATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTC 11673 |||| | || | || || |||||||| || | || ||||| | || || || || Sbjct 2962 ATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTC 3021 Query 11674 ATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAA 11733 ||| || ||||| ||||| ||||| | || || ||||| ||||| || || | ||||| Sbjct 3022 ATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAA 3081 Query 11734 TGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTAC 11775 ||| || ||||||||||| || || || || || || || || Sbjct 3082 TGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCAC 3123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467458718670080