Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq177628 136 5e-27 >seq177628 Length=4820 Score = 136 bits (150), Expect = 5e-27 Identities = 311/465 (67%), Gaps = 5/465 (1%) Strand=Plus/Plus Query 36142 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 36201 |||| | || | ||| ||||| |||||| ||| | |||||||| | || || | || Sbjct 2962 ATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTC 3021 Query 36202 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 36261 || || || || | ||| ||||| || || |||||||| | ||| || ||||| ||||| Sbjct 3022 ATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAA 3081 Query 36262 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGC-AAAGGCAATAAGTCTCTCTCCATAAC 36320 ||| || |||||||| || ||||| || ||||| |||| || ||| | ||| || | Sbjct 3082 TGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAG-CGCTCGGCAAAGG 3140 Query 36321 CGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 36377 || || |||| |||||||| ||||||| || || || || | ||| || | Sbjct 3141 TGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGA 3200 Query 36378 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 36437 | ||||| | |||| || ||||| | |||| | ||| || ||| || || | Sbjct 3201 TCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGA 3260 Query 36438 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 36497 | | || ||| | || || ||||||||||| || |||||||| || ||||| | Sbjct 3261 TGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAAGC 3320 Query 36498 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 36557 | | || || | ||| ||||| | | || || || | || || || || | Sbjct 3321 AGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGACGA 3380 Query 36558 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 36602 | ||||| ||| || || || ||||| ||||| ||||||| Sbjct 3381 TGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAAT 3425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656675193610880