Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq177628 161 1e-34 seq161514 100 4e-16 >seq177628 Length=4820 Score = 161 bits (178), Expect = 1e-34 Identities = 325/477 (68%), Gaps = 5/477 (1%) Strand=Plus/Plus Query 49944 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 50003 |||| | || | ||| ||||| |||||| ||||| |||||||| | || || || || Sbjct 2962 ATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTC 3021 Query 50004 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 50063 || || || || | ||| ||||| || || |||||||| | ||| || ||||| ||||| Sbjct 3022 ATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAA 3081 Query 50064 TGACCCAGAAAAGAAGATTCCTTCTACTGCGGC-AAAGGCAACAAGTCTCTCTCCATAAC 50122 |||||| |||||||| || ||||| || || || |||| || |||| | ||| || | Sbjct 3082 TGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAG-CGCTCGGCAAAGG 3140 Query 50123 TGG--CG-CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 50179 ||| || |||| |||||||| ||||||| || || || || | ||| || | Sbjct 3141 TGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGA 3200 Query 50180 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGA 50239 |||| || | ||||| || ||||| | |||| | ||| || ||| || |||| Sbjct 3201 TCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGA 3260 Query 50240 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 50299 | | || ||| | || || ||||||||||| || || ||||| || ||||| | Sbjct 3261 TGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAAGC 3320 Query 50300 ATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTA 50359 | | || || | ||| ||||| | | || || || | || || || || | Sbjct 3321 AGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGACGA 3380 Query 50360 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGG 50416 | ||||| ||| || || || ||||| ||||| |||||||| |||||||| Sbjct 3381 TGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAATGGCGTTCGTTGG 3437 >seq161514 Length=192 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 49966 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 50025 || ||| ||||| || ||||| | || || || ||||| || ||||| | ||| ||| Sbjct 1 AAGTCGGTGTGCATTCCTTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAATCCCGGC 60 Query 50026 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCT 50085 || || || ||||| || | ||| || |||||||||||||| || || |||||||| || Sbjct 61 ATGAGTCCGCGCTTCTTCATCCAGAAAATGGACGCAAATGAACCGGAGAAGAAGATGCCC 120 Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCA 50118 || || ||||| || || || || | ||| ||| Sbjct 121 TCGACCGCGGCGAACGCGACGAGACGCTCGCCA 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716634451172480