Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq177628 123 2e-23 >seq177628 Length=4820 Score = 123 bits (136), Expect = 2e-23 Identities = 254/375 (68%), Gaps = 2/375 (1%) Strand=Plus/Plus Query 13851 TTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATA 13910 || |||||| | || | || || |||||||| || | |||||| || | || || Sbjct 2957 TTCAGATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATG 3016 Query 13911 AGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13970 || || || || ||||| ||||| ||||| | || || ||||| | ||| || || | Sbjct 3017 AGCTCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAG 3076 Query 13971 GCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCA 14030 ||||||||||| ||||||||||| || ||||| || || || || | || || || || Sbjct 3077 GCAAATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCA 3136 Query 14031 AACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAA 14090 || | | ||||| ||| ||||| || |||||| |||| ||| || ||| | Sbjct 3137 AAGGTGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACAT 3196 Query 14091 TCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTA 14150 || || || | |||| || | ||| ||| || || | ||| || || Sbjct 3197 GGGATCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTG 3256 Query 14151 TCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA 14209 || || || ||| | ||| | || ||||| ||||||||||| || ||||||||||| Sbjct 3257 TCGATGAG-GAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATA 3315 Query 14210 AAAGCATCTAGCTTC 14224 ||||| | ||||| Sbjct 3316 GAAGCAGCGGGCTTC 3330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478636426908800