Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq177628 100 3e-16 >seq177628 Length=4820 Score = 100 bits (110), Expect = 3e-16 Identities = 250/377 (66%), Gaps = 2/377 (1%) Strand=Plus/Plus Query 13639 TTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATA 13698 || |||||| | || | || || |||||||| || | |||||| || | || || Sbjct 2957 TTCAGATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATG 3016 Query 13699 AGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13758 || || || || ||||| ||||| ||||| | || || ||||| | ||| || || | Sbjct 3017 AGCTCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAG 3076 Query 13759 GCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCA 13818 || ||||| || ||||||||||| || ||||| || || || || | | || || || Sbjct 3077 GCAAATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCA 3136 Query 13819 AACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAA 13878 || | | ||||| || ||||| || |||||| |||| ||| || ||| | Sbjct 3137 AAGGTGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACAT 3196 Query 13879 TCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTA 13938 || || || | |||| ||| | || ||| || || | ||| || || Sbjct 3197 GGGATCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTG 3256 Query 13939 TCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATA 13997 || || || ||| | ||| | || ||||| |||||||| || || ||||||||||| Sbjct 3257 TCGATGAG-GAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATA 3315 Query 13998 AAAACATCTAGCTTCTG 14014 || || | ||||||| Sbjct 3316 GAAGCAGCGGGCTTCTG 3332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477499819044480