Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq177628 149 8e-31 >seq177628 Length=4820 Score = 149 bits (164), Expect = 8e-31 Identities = 314/465 (68%), Gaps = 5/465 (1%) Strand=Plus/Plus Query 42049 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTC 42108 |||| | || | ||| ||||| |||||| ||||| ||||| || | || || | || Sbjct 2962 ATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTC 3021 Query 42109 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAA 42168 || || || || | ||| ||||| || || |||||||| | ||| || || || ||||| Sbjct 3022 ATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAA 3081 Query 42169 TGATCCAGAAAAGAAGATTCCTTCTACTGCCGC-AAAGGCAATAAGTCTCTCTCCATAAC 42227 ||| || |||||||| || ||||| || ||||| |||| || ||| | ||| || | Sbjct 3082 TGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAG-CGCTCGGCAAAGG 3140 Query 42228 CGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 42284 || || |||| |||||||| ||||||| || || || || | ||| || | Sbjct 3141 TGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGA 3200 Query 42285 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGA 42344 |||| || | ||||| || ||||| | |||| | ||| || ||| || |||| Sbjct 3201 TCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGA 3260 Query 42345 TCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 42404 | | || ||| | || || ||||||||||| || || ||||| || ||||| | Sbjct 3261 TGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAAGC 3320 Query 42405 ATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTA 42464 | | ||| || | |||| ||||| | | || || || | || ||||| || | Sbjct 3321 AGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGACGA 3380 Query 42465 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 42509 | ||||| ||| || || || ||||| ||||| ||||||| Sbjct 3381 TGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAAT 3425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669612089864320