Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq177628 132 7e-26 seq571 125 1e-23 seq161514 100 4e-16 >seq177628 Length=4820 Score = 132 bits (146), Expect = 7e-26 Identities = 372/561 (66%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||||||||| ||||||| ||| ||||| | || ||| | || || Sbjct 3534 ATATGGCAAATGTACAAAAAGGCCCAGGCCTGCTTCTGGACTGCAGAGGAGATAGACCTC 3475 Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 ||| | ||| | ||| ||| | | | || ||| || || | ||||| || Sbjct 3474 TCCCACGACGTTCTCGACTGGACAAGCAACCTCAACGCCAAC-GAACGCCATTTTATTTC 3416 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197 || | ||||||||||| |||| ||| || || ||||||||||| || || || || Sbjct 3415 CCATGTCTTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCCTGGAGCG 3356 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG--TGCTTTTACGGATTCCAAATCATG 125255 ||||| ||| | | || || || | | ||||| || || || ||||||||| Sbjct 3355 TTTCTC--AAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATG 3298 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314 || || ||| | ||||| || | |||||| || || |||| ||| ||||| ||||| Sbjct 3297 ATGGAAAACATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATCCT 3238 Query 125315 GC--AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTAT-ACGTAAAAA 125371 || |||| | | || || | || | || ||| | || | ||| | | ||| Sbjct 3237 GCTGAACGGGAGTA---TCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAAA 3181 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 ||| | |||| | ||||||| ||| | || | | ||||| | |||| Sbjct 3180 -GCTGACTGGGCTCTCAAGTGGATCTCGGACAAACGTTCCACCTTTGCCGAGCGCTTGGT 3122 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 ||| ||||| ||||| || || || |||||||| || ||||| |||| || ||| | Sbjct 3121 GGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTCTGGAT 3062 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 ||| ||||| || || ||||| ||| |||| | || ||| | || || ||||| Sbjct 3061 CAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGA 3002 Query 125552 GGGCCTACACTGTGACTTTGC 125572 |||| | ||| || ||||| Sbjct 3001 GGGCATGCACACCGATTTTGC 2981 >seq571 Length=811 Score = 125 bits (138), Expect = 1e-23 Identities = 330/496 (67%), Gaps = 6/496 (1%) Strand=Plus/Minus Query 125029 TGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACC 125088 ||||||| |||| || || || || ||||| | ||| || |||| |||||| ||||| Sbjct 495 TGTACAAGCAGGCACAAGCGTCTTTCTGGACTGCCGAGGAAATCGACCTGTCCCAGGACA 436 Query 125089 TGTACGATTGG-GAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTG 125147 ||| ||| | ||| | | || || |||||| || || || ||| | | Sbjct 435 CTCGCGACTGGAGGGACAAGCT-GAGCGATGATGAGCGCCTTTTCATCTCACACGTCCTC 377 Query 125148 GCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAA 125207 || || || |||| ||| ||||| ||||||||||| || || | |||| ||| | | Sbjct 376 GCTTTTTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTTGTAGCACGGTTCGCCAAT 317 Query 125208 GAGTTGACCATTC-CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGATTGAGAACG 125265 || || | | | | |||| ||| ||||| ||||||||||| || ||||| ||||||| Sbjct 316 GAAGTG-CAGTGCGCTGAGGC-TCGCTGCTTCTACGGATTCCAGATTATGATGGAGAACG 259 Query 125266 TGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC 125325 | ||||| |||| ||||| || || |||| ||| | | ||||| |||| Sbjct 258 TTCACTCCGAAACTTACTCCCTGCTAATCGACACTTACGTCAGGGATCCTGTGGAGAAAC 199 Query 125326 ACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGA 125385 || | | ||||| |||| || | || | | || ||||| | |||| | Sbjct 198 ACCGCTTGCTGAACGCGGTCGAGACCATCGAGTGCGTCAGGAACAAGGCCGAGTGGGCGG 139 Query 125386 TTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCG 125445 | ||||||| |||| | | | | || || | || ||||| ||||| || | Sbjct 138 TGAAGTGGATCACCGACGGGCACGCCACTTTTGCGGAGCGCCTCGTGGCTTTCGCGGCGG 79 Query 125446 TAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGAC 125505 | ||||| |||||||| || || ||| || ||| | || ||||||||||| || || | Sbjct 78 TGGAGGGTATCTTCTTCTCAGGCTCTTTCGCTGCCGTGTTCTGGCTCAAGAAACGGGGTC 19 Query 125506 TCATGCCCGGACTGAC 125521 | ||||| ||| |||| Sbjct 18 TGATGCCAGGATTGAC 3 >seq161514 Length=192 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 125388 CGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTA 125447 || |||||| | ||| | |||| | | | ||| | || || || |||||||| || Sbjct 182 CGATGGATCAACGACCAGCAGTCCACCTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTC 123 Query 125448 GAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTC 125507 |||||||||||||| || ||| |||||| |||| || ||| | ||||||||||||||| Sbjct 122 GAGGGCATCTTCTTCTCCGGTTCATTTGCGTCCATTTTCTGGATGAAGAAGCGCGGACTC 63 Query 125508 ATGCCCGGACTGACG 125522 ||||| ||| ||||| Sbjct 62 ATGCCGGGATTGACG 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739372993896320