Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq177628 132 7e-26
seq571 125 1e-23
seq161514 100 4e-16
>seq177628
Length=4820
Score = 132 bits (146), Expect = 7e-26
Identities = 372/561 (66%), Gaps = 14/561 (2%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||||||||| ||||||| ||| ||||| | || ||| | || ||
Sbjct 3534 ATATGGCAAATGTACAAAAAGGCCCAGGCCTGCTTCTGGACTGCAGAGGAGATAGACCTC 3475
Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||| | ||| | ||| ||| | | | || ||| || || | ||||| ||
Sbjct 3474 TCCCACGACGTTCTCGACTGGACAAGCAACCTCAACGCCAAC-GAACGCCATTTTATTTC 3416
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|| | ||||||||||| |||| ||| || || ||||||||||| || || || ||
Sbjct 3415 CCATGTCTTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCCTGGAGCG 3356
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG--TGCTTTTACGGATTCCAAATCATG 125255
||||| ||| | | || || || | | ||||| || || || |||||||||
Sbjct 3355 TTTCTC--AAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATG 3298
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314
|| || ||| | ||||| || | |||||| || || |||| ||| ||||| |||||
Sbjct 3297 ATGGAAAACATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATCCT 3238
Query 125315 GC--AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTAT-ACGTAAAAA 125371
|| |||| | | || || | || | || ||| | || | ||| | | |||
Sbjct 3237 GCTGAACGGGAGTA---TCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAAA 3181
Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431
||| | |||| | ||||||| ||| | || | | ||||| | ||||
Sbjct 3180 -GCTGACTGGGCTCTCAAGTGGATCTCGGACAAACGTTCCACCTTTGCCGAGCGCTTGGT 3122
Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491
||| ||||| ||||| || || || |||||||| || ||||| |||| || ||| |
Sbjct 3121 GGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTCTGGAT 3062
Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551
||| ||||| || || ||||| ||| |||| | || ||| | || || |||||
Sbjct 3061 CAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGA 3002
Query 125552 GGGCCTACACTGTGACTTTGC 125572
|||| | ||| || |||||
Sbjct 3001 GGGCATGCACACCGATTTTGC 2981
>seq571
Length=811
Score = 125 bits (138), Expect = 1e-23
Identities = 330/496 (67%), Gaps = 6/496 (1%)
Strand=Plus/Minus
Query 125029 TGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACC 125088
||||||| |||| || || || || ||||| | ||| || |||| |||||| |||||
Sbjct 495 TGTACAAGCAGGCACAAGCGTCTTTCTGGACTGCCGAGGAAATCGACCTGTCCCAGGACA 436
Query 125089 TGTACGATTGG-GAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTG 125147
||| ||| | ||| | | || || |||||| || || || ||| | |
Sbjct 435 CTCGCGACTGGAGGGACAAGCT-GAGCGATGATGAGCGCCTTTTCATCTCACACGTCCTC 377
Query 125148 GCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAA 125207
|| || || |||| ||| ||||| ||||||||||| || || | |||| ||| | |
Sbjct 376 GCTTTTTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTTGTAGCACGGTTCGCCAAT 317
Query 125208 GAGTTGACCATTC-CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGATTGAGAACG 125265
|| || | | | | |||| ||| ||||| ||||||||||| || ||||| |||||||
Sbjct 316 GAAGTG-CAGTGCGCTGAGGC-TCGCTGCTTCTACGGATTCCAGATTATGATGGAGAACG 259
Query 125266 TGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC 125325
| ||||| |||| ||||| || || |||| ||| | | ||||| ||||
Sbjct 258 TTCACTCCGAAACTTACTCCCTGCTAATCGACACTTACGTCAGGGATCCTGTGGAGAAAC 199
Query 125326 ACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGA 125385
|| | | ||||| |||| || | || | | || ||||| | |||| |
Sbjct 198 ACCGCTTGCTGAACGCGGTCGAGACCATCGAGTGCGTCAGGAACAAGGCCGAGTGGGCGG 139
Query 125386 TTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCG 125445
| ||||||| |||| | | | | || || | || ||||| ||||| || |
Sbjct 138 TGAAGTGGATCACCGACGGGCACGCCACTTTTGCGGAGCGCCTCGTGGCTTTCGCGGCGG 79
Query 125446 TAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGAC 125505
| ||||| |||||||| || || ||| || ||| | || ||||||||||| || || |
Sbjct 78 TGGAGGGTATCTTCTTCTCAGGCTCTTTCGCTGCCGTGTTCTGGCTCAAGAAACGGGGTC 19
Query 125506 TCATGCCCGGACTGAC 125521
| ||||| ||| ||||
Sbjct 18 TGATGCCAGGATTGAC 3
>seq161514
Length=192
Score = 100 bits (110), Expect = 4e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 125388 CGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTA 125447
|| |||||| | ||| | |||| | | | ||| | || || || |||||||| ||
Sbjct 182 CGATGGATCAACGACCAGCAGTCCACCTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTC 123
Query 125448 GAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTC 125507
|||||||||||||| || ||| |||||| |||| || ||| | |||||||||||||||
Sbjct 122 GAGGGCATCTTCTTCTCCGGTTCATTTGCGTCCATTTTCTGGATGAAGAAGCGCGGACTC 63
Query 125508 ATGCCCGGACTGACG 125522
||||| ||| |||||
Sbjct 62 ATGCCGGGATTGACG 48
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 739372993896320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |