Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq177628 107 2e-18 >seq177628 Length=4820 Score = 107 bits (118), Expect = 2e-18 Identities = 258/388 (66%), Gaps = 2/388 (1%) Strand=Plus/Plus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 ||||| | || | || ||||||||||| ||||| || || || | || || ||| Sbjct 2960 AGATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGC 3019 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 || || || ||||| | |||||||||||||| || ||||| ||||| || || | ||| Sbjct 3020 TCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCA 3079 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312 || || || ||||| ||||| |||||||| || || || || | ||| | || || | Sbjct 3080 AATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCAAAG 3139 Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372 || | ||| | |||||||| ||||||| ||||| | || | || Sbjct 3140 GTGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGG 3199 Query 13373 ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCT 13432 || | || | || | || | ||| | ||| | || |||||| || || Sbjct 3200 ATCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCG 3259 Query 13433 ATCAATAAGCTA-TACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAA 13491 || | ||| | ||| | || || ||||| ||||||||| ||||| |||||||| || Sbjct 3260 AT-GAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAA 3318 Query 13492 ACATCTAGCCTCTGATACCTGAACTTCG 13519 || | || |||| ||||||||||| Sbjct 3319 GCAGCGGGCTTCTGCGGCCTGAACTTCG 3346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430026259080864