Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq181023 95.1 3e-14 seq177628 95.1 3e-14 >seq181023 Length=1937 Score = 95.1 bits (104), Expect = 3e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||||||||| || || ||||| | || | ||| || || | ||| | |||||| Sbjct 1578 GACAGAGTTCTACCATCGTCGAGTTGCATCCCCGAAAATATGAGTCCCTGGTCATCAGGG 1519 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||||||||| || |||| || | | || |||| || || | Sbjct 1518 GGGATCCCTTCTTTATCCTGAATCTTGGCCTTTATGTTGGCGATTGTGTCGC-AGCTTTT 1460 Query 104510 -ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || ||||| || |||||||| || || | ||| || || Sbjct 1459 CACTTCTAGGGTGATAGTCTTGCCGGTTAATGTCTTCAC 1421 >seq177628 Length=4820 Score = 95.1 bits (104), Expect = 3e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 269135 TTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTT 269194 || || ||||| || || || ||||||||||||||||| ||||| |||||| | || || Sbjct 3126 TTGGTGGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTC 3067 Query 269195 TGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGG 269254 ||| | || || | || |||||||| ||||| || ||||| || || | || ||| | Sbjct 3066 TGGATCAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGC 3007 Query 269255 GACGAAGGTTTACACTGCGACTTCGCTTGTTT 269286 ||||| || | ||| ||| || || || || Sbjct 3006 GACGAGGGCATGCACACCGATTTTGCATGCTT 2975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148713010782656