Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq181023 95.1 3e-14
seq177628 95.1 3e-14
>seq181023
Length=1937
Score = 95.1 bits (104), Expect = 3e-14
Identities = 118/159 (74%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||||||||| || || ||||| | || | ||| || || | ||| | ||||||
Sbjct 1578 GACAGAGTTCTACCATCGTCGAGTTGCATCCCCGAAAATATGAGTCCCTGGTCATCAGGG 1519
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||||||||||||||| || |||| || | | || |||| || || |
Sbjct 1518 GGGATCCCTTCTTTATCCTGAATCTTGGCCTTTATGTTGGCGATTGTGTCGC-AGCTTTT 1460
Query 104510 -ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| ||||| || |||||||| || || | ||| || ||
Sbjct 1459 CACTTCTAGGGTGATAGTCTTGCCGGTTAATGTCTTCAC 1421
>seq177628
Length=4820
Score = 95.1 bits (104), Expect = 3e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 269135 TTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTT 269194
|| || ||||| || || || ||||||||||||||||| ||||| |||||| | || ||
Sbjct 3126 TTGGTGGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTC 3067
Query 269195 TGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGG 269254
||| | || || | || |||||||| ||||| || ||||| || || | || ||| |
Sbjct 3066 TGGATCAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGC 3007
Query 269255 GACGAAGGTTTACACTGCGACTTCGCTTGTTT 269286
||||| || | ||| ||| || || || ||
Sbjct 3006 GACGAGGGCATGCACACCGATTTTGCATGCTT 2975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1148713010782656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |