Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq180219 114 2e-21 seq181884 91.5 2e-14 seq172865 91.5 2e-14 >seq180219 Length=6790 Score = 114 bits (126), Expect = 2e-21 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 16468 CCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGT 16527 || ||| ||||||||||| |||||||| ||||| ||||| ||||| || || |||||| | Sbjct 2102 CCCAGGTATCACCAAGCCCGCTATCCGCCGTCTCGCTCGCCGTGGAGGTGTGAAGCGTAT 2161 Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587 ||| || | |||| ||||||| || | ||| | ||||||||||| ||| ||| || Sbjct 2162 CTCYGGCCTCATCTACGAAGAGACSCGCGGTGTSCTCAAGATCTTCCTSGAGAACGTCAT 2221 Query 16588 CCATGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 || || | || ||| ||||||||||| || || Sbjct 2222 CCGCGACTCGGTCACCTACACCGAGCACGCCAAGCG 2257 >seq181884 Length=30853 Score = 91.5 bits (100), Expect = 2e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| || |||||||||||||||||||||||||| || |||||| |||| Sbjct 407 AGGTATCACAAAGCCCGCAATCCGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTC 348 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 || | |||| || |||| || | ||| | || |||||||| Sbjct 347 CGGTCTCATCTACGAGGAGACCCGGGGTGTCCTCAAAATCTTCCT 303 >seq172865 Length=13054 Score = 91.5 bits (100), Expect = 2e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| || |||||||||||||||||||||||||| || |||||| |||| Sbjct 63 AGGTATCACAAAGCCCGCAATCCGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTC 122 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 || | |||| || |||| || | ||| | || |||||||| Sbjct 123 CGGTCTCATCTACGAGGAGACCCGGGGTGTCCTCAAAATCTTCCT 167 Score = 91.5 bits (100), Expect = 2e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| || |||||||||||||||||||||||||| || |||||| |||| Sbjct 12992 AGGTATCACAAAGCCCGCAATCCGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTC 12933 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 || | |||| || |||| || | ||| | || |||||||| Sbjct 12932 CGGTCTCATCTACGAGGAGACCCGGGGTGTCCTCAAAATCTTCCT 12888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78908766868176