Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq177628 91.5 2e-13
>seq177628
Length=4820
Score = 91.5 bits (100), Expect = 2e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 21461 TGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCA 21520
||| | || | ||| ||||||||||| |||| || || || | || || | |||
Sbjct 2963 TGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCA 3022
Query 21521 TTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAAT 21580
|| || ||||| || || ||||| | || | |||||| | ||| || || || ||||||
Sbjct 3023 TTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAAT 3082
Query 21581 GCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTA 21640
| ||||||||||| || || |||||||| || || || || || || || | | ||
Sbjct 3083 GACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCAAAGGTG 3142
Query 21641 GATTCTTTATCCAATATCCATTT 21663
|| ||| ||| | ||||| ||
Sbjct 3143 GAACGTTTGTCCGAGATCCACTT 3165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530690512919680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |