Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq177628 140 4e-28 >seq177628 Length=4820 Score = 140 bits (154), Expect = 4e-28 Identities = 312/465 (67%), Gaps = 5/465 (1%) Strand=Plus/Plus Query 33288 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 33347 |||| | || | ||| ||||| |||||| ||||| |||||||| | || || || || Sbjct 2962 ATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTC 3021 Query 33348 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAA 33407 || || || || | ||| ||||| || || |||||||| | ||| || ||||| || || Sbjct 3022 ATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAA 3081 Query 33408 TGATCCAGAAAAGAAGATTCCTTCTACTGCAGC-AAAGGCAATAAGTCTCTCTCCATAAC 33466 ||| || |||||||| || ||||| || || || |||| || ||| | ||| || | Sbjct 3082 TGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAG-CGCTCGGCAAAGG 3140 Query 33467 CGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 33523 || | |||| |||||||| ||||||| || || || || | ||| || | Sbjct 3141 TGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGA 3200 Query 33524 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGA 33583 |||| || | ||||| || ||||| | |||| | ||| || ||| || |||| Sbjct 3201 TCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGA 3260 Query 33584 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33643 | | || ||| | || || ||||||||||| || || ||||| || ||||| | Sbjct 3261 TGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAAGC 3320 Query 33644 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTA 33703 | | || || | ||| ||||| | | || || ||| | || || || || | Sbjct 3321 AGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGACGA 3380 Query 33704 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 33748 | ||||| ||| || || || ||||| ||||| ||||||| Sbjct 3381 TGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAAT 3425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621529745941120