Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq181166 107 2e-18 seq179421 107 2e-18 seq179755 104 2e-17 >seq181166 Length=959 Score = 107 bits (118), Expect = 2e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 145061 ACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTCA 145120 |||||||| |||||||||| | ||| || ||| || | ||| |||| | || || Sbjct 518 ACGACCTGGAACTCGCCGGAGAGCACGCGCCGCGTGTAGATGTTGCTCGTGTACGGCTCG 459 Query 145121 AAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAAT 145180 || ||||||| || || ||||| || |||| ||||| ||||| ||| | Sbjct 458 AAGCACTCGTTGTTCCCGAGGATCTGGCTCGTCGACGCGGTCGGCATCGGCGCGGTGAGC 399 Query 145181 AATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGC 145240 | || ||||| ||||| |||| ||| | |||| ||||| |||| ||||| ||| Sbjct 398 AGGGAGTTGCGGAGGCCCGTCTTCGCGATCTTGGCCTTGAGCGTGTCCCAGTCCCACAGC 339 Query 145241 GAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCC 145299 || ||||| | ||| |||||||||||||||||| ||||| ||||||||||| Sbjct 338 GAGCTCGGCGTGACGCCCCACATGTCGTACTGCAGCTCGCCCTGCGACGCGGGGCTGCC 280 >seq179421 Length=8220 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| |||||| || | || | ||||||||||| || |||||||| |||||| Sbjct 1491 CCTCCACGCAGACGCAGAACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1550 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | |||||||||||||| ||| Sbjct 1551 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 1610 Query 131128 AT 131129 || Sbjct 1611 AT 1612 >seq179755 Length=18176 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| | || | ||||| ||||| || |||||||| ||||| Sbjct 9480 CCACCACGCAGACGGAGCACCAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGCTG 9539 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 9540 AGCGTGCGCCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAACCGCTGCTGGTCGGGGGGG 9599 Query 131128 AT 131129 || Sbjct 9600 AT 9601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470938782074880