Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq174776 96.9 7e-15 seq180151 89.7 1e-12 >seq174776 Length=2373 Score = 96.9 bits (106), Expect = 7e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 || || ||||| ||||| |||||||||||||||||| | | |||||||| || | || Sbjct 255 GGCTCCCTGTCTGGTGGGTGGAAGATGAAGCTGGCCTTGGCCCGCGCCATGCTCTTCCGC 196 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 ||||| | || ||||| || ||||| |||||||| | || | |||||| || ||| Sbjct 195 GCCGACATTCTCCTGCTCGACGAGCCGACCAACCATCTTGATGTCGTCAACGTCGCATGG 136 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGA 279846 || | | |||||| |||| || |||| Sbjct 135 CTCGAGAACTACCTGACCAACCTCAAGA 108 >seq180151 Length=1518 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/188 (72%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 280173 GTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACC 280232 ||| | || ||||| ||| | || ||||| || || |||| |||| | ||||| | Sbjct 58 GTCCTCGGCCCCAACGGTTCCGGCAAGTCCACGCTCGTCAAGCTCCTCATCGGCGACATG 117 Query 280233 CAGGCCA-CTGAGG-GGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 || | | | || ||| | | |||||||| |||||| || || | ||||||||| Sbjct 118 GAGCAGAACCGTGGCGGTGAGATCTGGAAGCACCCCAACTTGGTCATCGGTTACGTCGCG 177 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| |||||||||||||| |||||||| |||| ||| || | | ||||| | Sbjct 178 CAGCACGCCTTCCACCACATCGACAACCACCTCGACAAGACGCCCCTCGAGTACATGCTC 237 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 238 TGGCGGTA 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025439591648912