Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq571 194 3e-44 seq177628 187 5e-42 seq181166 138 2e-27 seq161514 104 4e-17 >seq571 Length=811 Score = 194 bits (214), Expect = 3e-44 Identities = 347/498 (70%), Gaps = 9/498 (2%) Strand=Plus/Minus Query 42310 TGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGACA 42369 |||||||| |||| || || |||||| |||||||| || |||||| || |||||| Sbjct 495 TGTACAAGCAGGCACAAGCGTCTTTCTGGACTGCCGAGGAAATCGACCTGTCCCAGGACA 436 Query 42370 CGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAGT---TTTTCCTCAAAAACATACTG 42425 | || |||| || || ||||| | || || ||||| || | || | || Sbjct 435 CTCGCGACTGG-AGGGACAAGCTGAGCGATGATGAGCGCCTTTTCATCTCACACGTCCTC 377 Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 || || ||||||||||| || ||||| ||||| || ||||| | | ||||| || Sbjct 376 GCTTTTTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTTGTAGCACGGTTCGCCAAT 317 Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545 || ||||||| | |||||| |||||||||||||| |||||||| || |||||||| Sbjct 316 GAAGTGCAGTGCGCTGAGGCTCGCTGCTTCTACGGATTCCAGATTATGATGGAGAACGTT 257 Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605 ||||| || ||| || || || |||| ||| || |||||| || ||| || Sbjct 256 CACTCCGAAACTTACTCCCTGCTAATCGACACTTACGTCAGGGATCCTGTGGAGAAACAC 197 Query 42606 GGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTC 42665 | || | || || | ||||| || ||| ||| ||| ||||| || |||||| | Sbjct 196 CGCTTGCTGAACGCGGTCGAGACCATCGAGTGCGTCAGGAACAAGGCCGAGTGGGCGGTG 137 Query 42666 AACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGT 42724 || |||||| | | | | |||| || || | ||| | || || || || | || || Sbjct 136 AAGTGGATC-ACCGACGGGCACGCCACTTTTGCGGAGCGCCTCGTGGCTTTCGCGGCGGT 78 Query 42725 CGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC 42784 ||||| ||||||||||| ||| | ||||| || | |||||||||||| | | || ||| Sbjct 77 GGAGGGTATCTTCTTCTCAGGCTCTTTCGCTGCCGTGTTCTGGCTCAAG-AAACGGGGTC 19 Query 42785 -GATGCCCGGACTCACCT 42801 |||||| ||| | |||| Sbjct 18 TGATGCCAGGATTGACCT 1 >seq177628 Length=4820 Score = 187 bits (206), Expect = 5e-42 Identities = 311/444 (70%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG-GTTCATG 42482 ||||||||||||||||||| |||||||| ||||| |||||||| || || ||| | Sbjct 3407 TGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCT--CCTGGAGCGTTTCTC 3350 Query 42483 AAA-GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 || || || ||| | || || ||||||||||| || || || || || || || Sbjct 3349 AAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATGATGGAAAA 3290 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 | | ||||| ||| |||| | || || ||||||| || | ||||| | || || Sbjct 3289 CATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATCCTGCTGAACG 3230 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | |||||| | ||| |||||||||| || || |||||| || || |||||||| Sbjct 3229 GGAGTATCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAAAGCTGACTGGGC 3170 Query 42662 GCTCAACTGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTACC 42719 ||||| |||||| | | ||| | || || | |||| | |||| || || | Sbjct 3169 TCTCAAGTGGATC--TCGGACAAACGTTCCACCTTTGCCGAGCGCTTGGTGGCTTTCGCG 3112 Query 42720 GCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAG 42779 ||||| || || || ||||| || || | || |||||||| |||||| |||| || | Sbjct 3111 GCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTCTGGATCAAAAAGCGG 3052 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 | | ||||| ||| | || |||||||| || ||||||||| | |||||||| |||| Sbjct 3051 GGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGAGGGCATGCAC 2992 Query 42840 AGGGACTTTGCCTGCCTCCTGTTC 42863 | || ||||| ||| | || ||| Sbjct 2991 ACCGATTTTGCATGCTTGCTCTTC 2968 Score = 100 bits (110), Expect = 5e-16 Identities = 203/297 (68%), Gaps = 5/297 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367 ||||| |||||||| | || | ||| |||||||||||||||||| |||||| | ||||| Sbjct 4512 ATGTATAAGAAGGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATGGACCTGTCGAAGGA 4570 Query 42368 CACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAAAAGTTTTTCCTCAAAAACATACT 42424 || | || |||| | || || | |||| ||| || | | || Sbjct 4571 CATGCACGACTGGAACAACAAGCTCAACGCCGACGAGCGSCACTTCATCTCYCATGTCCT 4630 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484 ||||| ||||| || || |||||||| ||||| ||||||||| | | ||| ||| Sbjct 4631 CGCCTTTTTCGCTGCGTCCGACGGCATTGTCAACGAGAACCTGCTCGAGCGTTTCTCGAA 4690 Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 || |||||| | ||||| || |||||||||||||||||||| || ||||| | Sbjct 4691 CGAAGTGCAGGTCGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATTATGATGGAGAATAT 4750 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 ||||| ||| ||| | || || |||| |||||| || |||| ||||| Sbjct 4751 TCACTCCGAGACATACTCTCTGTTGATCGACACATACATCAAAGAGCCCGCAGAGCG 4807 >seq181166 Length=959 Score = 138 bits (152), Expect = 2e-27 Identities = 404/618 (65%), Gaps = 35/618 (6%) Strand=Plus/Minus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||||| || |||| || |||| | || | |||||||||||| || |||||||| Sbjct 859 TGAACTGGATCGCCTGCGCCGCCGGC-TGCGTGCGCAGGTAGTACATCCCCGTCTTGAGC 801 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 || | ||| ||| || ||||||| ||||| || | |||| | || || | Sbjct 800 CCGCGCTTCCACCCGTAGAAGTGCATGCTCGTCAACTGCCCCATCGTCGGCGCGGGCAGG 741 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGC 243918 | |||| ||||||| |||||||||| || ||| | |||| || || Sbjct 740 T----GCAC--------GTTGAGGCTCTGGCTCTGGCAGATGAACG-CGCCGCGGTCNNN 694 Query 243919 GGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 |||||| ||||| || | ||||||||||| | |||| Sbjct 693 NNNNNNNNNNNNNNNNNNCTTCTGGCTGATCTCCCACACGGTCTTGTAGATCGATTTGAC 634 Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 || || |||| | |||||||||||| ||||| || |||||||| | | Sbjct 633 GTCGTCCGGGATCGTCGGGATGTTCTGCACGGAGCCGCGATGCGCGATGAGCATGTTCTT 574 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCC---TGTTCAC 244095 |||||| |||| ||||||||| | | || | |||| ||| ||| | ||| Sbjct 573 CATGTTGTCGTCCCACAGGCC---GAGGTCGACGAGCTCGCGCAGCAGCCACGGGCACAC 517 Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155 ||||| ||||| || || |||||||| ||| ||||| |||||| || |||||||| Sbjct 516 GACCTGGAACTCGCCGGAGAGCACGCGCCGCGTGTAGATGTTGCTCGTGTACGGCTCGAA 457 Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215 || ||| |||| || || ||||| ||| ||| |||||||| |||| ||||| Sbjct 456 GCACTCGTTGTTCCCGAGGATCTGGCTCGTCGACGCGGTCGGCATCGGCGCGGTGAGCAG 397 Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275 ||| | | ||| | || ||| | ||||| || ||||||||||| Sbjct 396 GGAGTTGCGGAGGCCCGTCTTCGCGATCTTGGCCTTGAGCGTGTCCCAGTCCCACA---G 340 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA--CG 244333 |||| |||| | ||| |||||||||||| |||||||| | || ||| || || Sbjct 339 CGAG-----CTCG-GCGTGACGCCCCACATGTCGTACTGCAGC-TCGCCCTGC-GACGCG 288 Query 244334 GGGCTGCCCTCGTAGGTC 244351 |||||||||||||| ||| Sbjct 287 GGGCTGCCCTCGTACGTC 270 >seq161514 Length=192 Score = 104 bits (114), Expect = 4e-17 Identities = 120/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 42690 ACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCC 42749 || || |||||| | || || || || |||| |||||||||||||||||||| || | Sbjct 158 ACCTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGTTCA 99 Query 42750 TTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAA 42808 || || ||||| |||||| | ||| || || || ||||| ||| | || |||||||| Sbjct 98 TTTGCGTCCATTTTCTGGATGAAGAAGCGCGGACTC-ATGCCGGGATTGACGTTCTCGAA 40 Query 42809 CGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847 ||| ||||||||| | ||||| || |||| | ||||| Sbjct 39 CGAGCTCATCAGCCGCGACGAAGGAATGCACACCGACTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942190450584320