Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq571 194 3e-44
seq177628 187 5e-42
seq181166 138 2e-27
seq161514 104 4e-17
>seq571
Length=811
Score = 194 bits (214), Expect = 3e-44
Identities = 347/498 (70%), Gaps = 9/498 (2%)
Strand=Plus/Minus
Query 42310 TGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGACA 42369
|||||||| |||| || || |||||| |||||||| || |||||| || ||||||
Sbjct 495 TGTACAAGCAGGCACAAGCGTCTTTCTGGACTGCCGAGGAAATCGACCTGTCCCAGGACA 436
Query 42370 CGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAGT---TTTTCCTCAAAAACATACTG 42425
| || |||| || || ||||| | || || ||||| || | || | ||
Sbjct 435 CTCGCGACTGG-AGGGACAAGCTGAGCGATGATGAGCGCCTTTTCATCTCACACGTCCTC 377
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|| || ||||||||||| || ||||| ||||| || ||||| | | ||||| ||
Sbjct 376 GCTTTTTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTTGTAGCACGGTTCGCCAAT 317
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
|| ||||||| | |||||| |||||||||||||| |||||||| || ||||||||
Sbjct 316 GAAGTGCAGTGCGCTGAGGCTCGCTGCTTCTACGGATTCCAGATTATGATGGAGAACGTT 257
Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605
||||| || ||| || || || |||| ||| || |||||| || ||| ||
Sbjct 256 CACTCCGAAACTTACTCCCTGCTAATCGACACTTACGTCAGGGATCCTGTGGAGAAACAC 197
Query 42606 GGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTC 42665
| || | || || | ||||| || ||| ||| ||| ||||| || |||||| |
Sbjct 196 CGCTTGCTGAACGCGGTCGAGACCATCGAGTGCGTCAGGAACAAGGCCGAGTGGGCGGTG 137
Query 42666 AACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGT 42724
|| |||||| | | | | |||| || || | ||| | || || || || | || ||
Sbjct 136 AAGTGGATC-ACCGACGGGCACGCCACTTTTGCGGAGCGCCTCGTGGCTTTCGCGGCGGT 78
Query 42725 CGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC 42784
||||| ||||||||||| ||| | ||||| || | |||||||||||| | | || |||
Sbjct 77 GGAGGGTATCTTCTTCTCAGGCTCTTTCGCTGCCGTGTTCTGGCTCAAG-AAACGGGGTC 19
Query 42785 -GATGCCCGGACTCACCT 42801
|||||| ||| | ||||
Sbjct 18 TGATGCCAGGATTGACCT 1
>seq177628
Length=4820
Score = 187 bits (206), Expect = 5e-42
Identities = 311/444 (70%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG-GTTCATG 42482
||||||||||||||||||| |||||||| ||||| |||||||| || || ||| |
Sbjct 3407 TGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCT--CCTGGAGCGTTTCTC 3350
Query 42483 AAA-GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541
|| || || ||| | || || ||||||||||| || || || || || || ||
Sbjct 3349 AAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATGATGGAAAA 3290
Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601
| | ||||| ||| |||| | || || ||||||| || | ||||| | || ||
Sbjct 3289 CATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATCCTGCTGAACG 3230
Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661
| |||||| | ||| |||||||||| || || |||||| || || ||||||||
Sbjct 3229 GGAGTATCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAAAGCTGACTGGGC 3170
Query 42662 GCTCAACTGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTACC 42719
||||| |||||| | | ||| | || || | |||| | |||| || || |
Sbjct 3169 TCTCAAGTGGATC--TCGGACAAACGTTCCACCTTTGCCGAGCGCTTGGTGGCTTTCGCG 3112
Query 42720 GCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAG 42779
||||| || || || ||||| || || | || |||||||| |||||| |||| || |
Sbjct 3111 GCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTCTGGATCAAAAAGCGG 3052
Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839
| | ||||| ||| | || |||||||| || ||||||||| | |||||||| ||||
Sbjct 3051 GGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGAGGGCATGCAC 2992
Query 42840 AGGGACTTTGCCTGCCTCCTGTTC 42863
| || ||||| ||| | || |||
Sbjct 2991 ACCGATTTTGCATGCTTGCTCTTC 2968
Score = 100 bits (110), Expect = 5e-16
Identities = 203/297 (68%), Gaps = 5/297 (2%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367
||||| |||||||| | || | ||| |||||||||||||||||| |||||| | |||||
Sbjct 4512 ATGTATAAGAAGGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATGGACCTGTCGAAGGA 4570
Query 42368 CACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAAAAGTTTTTCCTCAAAAACATACT 42424
|| | || |||| | || || | |||| ||| || | | ||
Sbjct 4571 CATGCACGACTGGAACAACAAGCTCAACGCCGACGAGCGSCACTTCATCTCYCATGTCCT 4630
Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484
||||| ||||| || || |||||||| ||||| ||||||||| | | ||| |||
Sbjct 4631 CGCCTTTTTCGCTGCGTCCGACGGCATTGTCAACGAGAACCTGCTCGAGCGTTTCTCGAA 4690
Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544
|| |||||| | ||||| || |||||||||||||||||||| || ||||| |
Sbjct 4691 CGAAGTGCAGGTCGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATTATGATGGAGAATAT 4750
Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601
||||| ||| ||| | || || |||| |||||| || |||| |||||
Sbjct 4751 TCACTCCGAGACATACTCTCTGTTGATCGACACATACATCAAAGAGCCCGCAGAGCG 4807
>seq181166
Length=959
Score = 138 bits (152), Expect = 2e-27
Identities = 404/618 (65%), Gaps = 35/618 (6%)
Strand=Plus/Minus
Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799
||||||||| || |||| || |||| | || | |||||||||||| || ||||||||
Sbjct 859 TGAACTGGATCGCCTGCGCCGCCGGC-TGCGTGCGCAGGTAGTACATCCCCGTCTTGAGC 801
Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859
|| | ||| ||| || ||||||| ||||| || | |||| | || || |
Sbjct 800 CCGCGCTTCCACCCGTAGAAGTGCATGCTCGTCAACTGCCCCATCGTCGGCGCGGGCAGG 741
Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGC 243918
| |||| ||||||| |||||||||| || ||| | |||| || ||
Sbjct 740 T----GCAC--------GTTGAGGCTCTGGCTCTGGCAGATGAACG-CGCCGCGGTCNNN 694
Query 243919 GGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978
|||||| ||||| || | ||||||||||| | ||||
Sbjct 693 NNNNNNNNNNNNNNNNNNCTTCTGGCTGATCTCCCACACGGTCTTGTAGATCGATTTGAC 634
Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038
|| || |||| | |||||||||||| ||||| || |||||||| | |
Sbjct 633 GTCGTCCGGGATCGTCGGGATGTTCTGCACGGAGCCGCGATGCGCGATGAGCATGTTCTT 574
Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCC---TGTTCAC 244095
|||||| |||| ||||||||| | | || | |||| ||| ||| | |||
Sbjct 573 CATGTTGTCGTCCCACAGGCC---GAGGTCGACGAGCTCGCGCAGCAGCCACGGGCACAC 517
Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155
||||| ||||| || || |||||||| ||| ||||| |||||| || ||||||||
Sbjct 516 GACCTGGAACTCGCCGGAGAGCACGCGCCGCGTGTAGATGTTGCTCGTGTACGGCTCGAA 457
Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215
|| ||| |||| || || ||||| ||| ||| |||||||| |||| |||||
Sbjct 456 GCACTCGTTGTTCCCGAGGATCTGGCTCGTCGACGCGGTCGGCATCGGCGCGGTGAGCAG 397
Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275
||| | | ||| | || ||| | ||||| || |||||||||||
Sbjct 396 GGAGTTGCGGAGGCCCGTCTTCGCGATCTTGGCCTTGAGCGTGTCCCAGTCCCACA---G 340
Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA--CG 244333
|||| |||| | ||| |||||||||||| |||||||| | || ||| || ||
Sbjct 339 CGAG-----CTCG-GCGTGACGCCCCACATGTCGTACTGCAGC-TCGCCCTGC-GACGCG 288
Query 244334 GGGCTGCCCTCGTAGGTC 244351
|||||||||||||| |||
Sbjct 287 GGGCTGCCCTCGTACGTC 270
>seq161514
Length=192
Score = 104 bits (114), Expect = 4e-17
Identities = 120/159 (75%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 42690 ACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCC 42749
|| || |||||| | || || || || |||| |||||||||||||||||||| || |
Sbjct 158 ACCTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGTTCA 99
Query 42750 TTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAA 42808
|| || ||||| |||||| | ||| || || || ||||| ||| | || ||||||||
Sbjct 98 TTTGCGTCCATTTTCTGGATGAAGAAGCGCGGACTC-ATGCCGGGATTGACGTTCTCGAA 40
Query 42809 CGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847
||| ||||||||| | ||||| || |||| | |||||
Sbjct 39 CGAGCTCATCAGCCGCGACGAAGGAATGCACACCGACTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 942190450584320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |