Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq180125 91.5 3e-13
seq179421 84.2 5e-11
>seq180125
Length=1791
Score = 91.5 bits (100), Expect = 3e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211
||||| ||||| ||| |||||| || || ||||| || || ||||| || || |
Sbjct 1589 ATCGGCATGAACGCCACGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGCCTCCTA 1530
Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271
|| ||||| | || ||||| ||||||||| || || |||| || ||||| |
Sbjct 1529 GTCGCTCTCGGCAACGATAAAGTCTACAATTCGGCAAACCCTTTCGATTTCATGGATATG 1470
Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321
||||| || |||| ||||||||||| ||||| ||||| ||| |||||
Sbjct 1469 ATTTCCCTGCAAGGCAAGACGAACTTTTTCGAGAAGCGCGTCTCGGACTA 1420
>seq179421
Length=8220
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
|| || || || |||||||| || || || || || || | ||| ||| || || |||
Sbjct 1675 CCCTCCTTGTCTTGGATTTTTGCCTTGACATTGTCGATGGTGTCGGACGACTCGACCTCG 1734
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct 1735 AGGGTGATCGTCTTACCCGTCAGGGTCTTGACGAAAATCTGCAT 1778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176903109737696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |