Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq180125 91.5 3e-13 seq179421 84.2 5e-11 >seq180125 Length=1791 Score = 91.5 bits (100), Expect = 3e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| ||| |||||| || || ||||| || || ||||| || || | Sbjct 1589 ATCGGCATGAACGCCACGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGCCTCCTA 1530 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 || ||||| | || ||||| ||||||||| || || |||| || ||||| | Sbjct 1529 GTCGCTCTCGGCAACGATAAAGTCTACAATTCGGCAAACCCTTTCGATTTCATGGATATG 1470 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 ||||| || |||| ||||||||||| ||||| ||||| ||| ||||| Sbjct 1469 ATTTCCCTGCAAGGCAAGACGAACTTTTTCGAGAAGCGCGTCTCGGACTA 1420 >seq179421 Length=8220 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || || |||||||| || || || || || || | ||| ||| || || ||| Sbjct 1675 CCCTCCTTGTCTTGGATTTTTGCCTTGACATTGTCGATGGTGTCGGACGACTCGACCTCG 1734 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| || ||||| ||||||||||| |||||||| Sbjct 1735 AGGGTGATCGTCTTACCCGTCAGGGTCTTGACGAAAATCTGCAT 1778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176903109737696