Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq177628 102 2e-16 seq180125 95.1 3e-14 >seq177628 Length=4820 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||||||||| | |||| ||| | |||||||| ||||| || || || ||| || Sbjct 2811 CTCATTGGCATGAATGCCAAACTGATGTGCCAGTACATTGAATTTGTGGCGGATCGCCTT 2752 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| ||||| | || || |||||| || | || || || | ||| ||||| Sbjct 2751 CTCGTCGCACTTGGGAACGAAAAGGTGTACCACGCATCCAATCCTTTCGACTTCATGGAC 2692 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | || ||||| ||||||||||| ||||| || || ||||| || Sbjct 2691 ATGATCTCGCTGCAAGGGAAAACCAACTTTTTTGAGAAGCGGGT 2648 >seq180125 Length=1791 Score = 95.1 bits (104), Expect = 3e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 243560 GGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619 |||| || ||||||||| | |||||| | ||||||||||| || || || |||||| Sbjct 1594 GGCTCATCGGCATGAACGCCACGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGCC 1535 Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679 | | |||| || || | || ||||| ||||| || ||||| || | || |||| Sbjct 1534 TCCTAGTCGCTCTCGGCAACGATAAAGTCTACAATTCGGCAAACCCTTTCGATTTCATGG 1475 Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726 | | ||||| || ||||| || || ||||| ||||| ||||| ||| Sbjct 1474 ATATGATTTCCCTGCAAGGCAAGACGAACTTTTTCGAGAAGCGCGTC 1428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1100307769519200